Vulpes lagopus (Arctic fox): 121501622
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Entry
121501622 CDS
T07435
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04136
Autophagy - other
vlg04140
Autophagy - animal
vlg04211
Longevity regulating pathway
vlg05010
Alzheimer disease
vlg05014
Amyotrophic lateral sclerosis
vlg05016
Huntington disease
vlg05017
Spinocerebellar ataxia
vlg05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121501622 (ATG13)
04136 Autophagy - other
121501622 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
121501622 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
121501622 (ATG13)
05014 Amyotrophic lateral sclerosis
121501622 (ATG13)
05016 Huntington disease
121501622 (ATG13)
05017 Spinocerebellar ataxia
121501622 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
121501622 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vlg04131
]
121501622 (ATG13)
03029 Mitochondrial biogenesis [BR:
vlg03029
]
121501622 (ATG13)
Membrane trafficking [BR:
vlg04131
]
Autophagy
Autophagosome formation proteins
ULK complex
121501622 (ATG13)
Atg1 complex
121501622 (ATG13)
Mitochondrial biogenesis [BR:
vlg03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
121501622 (ATG13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
121501622
NCBI-ProteinID:
XP_041629821
LinkDB
All DBs
Position
11:complement(66421749..66474311)
Genome browser
AA seq
550 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
TYPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPTPVVTDTLRVPMAGLAFSHQLSSS
RLSYQPAALGVGSADLAYPVVFAAGLNTTHPHQLMVPGKEGGVPLAPNQPAHGAQADQER
LATYTPSDGAHCAVTPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTL
TSLDIPFAMFAPKNLELEDADPMVNPPDSPETESPLQGSLHSDGSSGGSSGNTHDDFVMI
DFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVR
EFDAFVETLQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcccaggacagaaaggacctggacaagtttattaaatttttt
gccctcaagactgtccaagtgattgtccaggctcgacttggcgagaagatttgtactcgt
tcatcttcatccccaacgggttcagattggttcaatttagcaatcaaagacatcccagag
gttacacatgaagcaaaaaaggcactggccgggcagttgcctgcagtcgggagatcgatg
tgtgtggagatctctctcaagacatctgagggagattctatggaactagaaatttggtgt
ctcgaaatgaatgaaaagtgtgataaagagattaaagtgtcctacacggtgtacaacaga
ctgtcgctgctgctgaagtccctccttgccataactagggtgacaccagcttatagactc
tccagaaaacaggggcatgaatatgtcatattgtacaggatatattttggggaagttcag
ctgaatggcttaggagaaggtttccagacagttcgtgttgggacagtaggcacccctgtg
ggcaccatcactctttcttgcgcttacagaattaacttggcatttatgtctaccaggcaa
tttgagaggaccccacctatcatggggattatcattgatcactttgtggaccgtccctac
cccagctcctcacccatgcacccctgcaattacagaactgctggtgaggacactggagta
acatatccttctgtggaagattctcaagaagtgtgtaccacctctttttccacctcccct
ccatctcagtgtgtgtttactgtcacaaaggcacattttcagacccctactcctgtggtg
acggacactctgagggtccccatggcaggactggccttttcccatcaactctcaagctct
cgcctttcctatcagcctgctgccctgggcgttggatcagctgacctggcttacccagta
gtgtttgctgctggcctaaacaccacacaccctcatcagctcatggttcccgggaaggaa
ggtggggtaccccttgctcccaaccaacctgctcacggtgcccaggctgaccaggagaga
ctggcaacctacaccccttctgacggggcccactgcgctgtcacaccttccagcagcgag
gatactgaaactgtatcaaacagcagtgagggccgggcatccccccacgatgtcttggag
accatctttgtccgaaaagtgggggcttttgtcaacaaacccatcaaccaggtgaccctg
accagtctggacataccctttgccatgtttgctcccaagaatttggagctggaggatgct
gatcccatggtgaatcctccagattccccagagactgaatctcctctccagggcagcctg
cactctgatggctccagtgggggcagcagtggcaatacccatgatgactttgttatgatc
gacttcaaaccagctttttctaaagacgacattcttccgatggacttggggaccttctat
cgtgaatttcagaatcctcctcagctgagcagcctctccatagatatcggggcacagtcc
atggctgaggacttggactcactaccagagaagctggctgtgcacgagaagaatgtccga
gagtttgatgcctttgtagaaaccctgcagtaa
DBGET
integrated database retrieval system
