KEGG   Vulpes lagopus (Arctic fox): 121501747
Entry
121501747         CDS       T07435                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1 isoform X1
  KO
K10610  DNA damage-binding protein 1
Organism
vlg  Vulpes lagopus (Arctic fox)
Pathway
vlg03420  Nucleotide excision repair
vlg04120  Ubiquitin mediated proteolysis
vlg05161  Hepatitis B
vlg05170  Human immunodeficiency virus 1 infection
vlg05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:vlg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121501747 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    121501747 (DDB1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    121501747 (DDB1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    121501747 (DDB1)
   05161 Hepatitis B
    121501747 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vlg04121]
    121501747 (DDB1)
   03400 DNA repair and recombination proteins [BR:vlg03400]
    121501747 (DDB1)
Ubiquitin system [BR:vlg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     121501747 (DDB1)
DNA repair and recombination proteins [BR:vlg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      121501747 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      121501747 (DDB1)
SSDB
Motif
Pfam: CPSF_A Beta-prop_RSE1_1st Beta-prop_RSE1_2nd Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 121501747
NCBI-ProteinID: XP_041630035
LinkDB
Position
11:78717287..78750887
AA seq 1140 aa
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
LDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcgtacaactacgtggtaacggcccagaagcccaccgccgtgaacggctgcgtgacc
ggacactttacttcagccgaagacttgaacctgttgattgccaaaaacacgaggttggag
atctatgtggtcactgctgaggggcttcggcccgtcaaagaggtgggcatgtatgggaag
attgcagtcatggagctcttcaggcccaagggggagagcaaggacctactgtttatcctg
acagctaaatacaatgcctgcatcctggaatataagcagagtggcgagagcattgatatc
ataacgcgagcccatggcaatgtccaggaccgtattggccgcccctcagagactggcatt
attggcatcattgaccctgagtgccggatgattggcttgcgactctatgatggccttttc
aaggttattccgctagaccgggacaataaagagctcaaggcctttaacatccgcctggag
gagctgcatgtcatcgatgtcaagttcctatatggttgccaagcacctaccatctgcttt
gtctaccaggaccctcaggggcggcatgtgaaaacttacgaggtgtctctccgagagaag
gagttcaataagggcccttggaaacaggaaaatgtagaagctgaagcttccatggtgatt
gcagtcccagagcccttcggaggggccatcatcattggacaggaatcaatcacctatcac
aatggtgacaaatacctggcaattgctcctcctatcatcaagcaaagcacaattgtgtgt
cacaatcgtgtggaccccaatggttcccgctatctgctgggagacatggagggaaggctc
ttcatgctgcttttggagaaggaggaacagatggatggcactgtcaccctcaaagatctc
cgtgtggagctcctcggagagacttctattgctgaatgcttgacataccttgataatggt
gttgtgtttgttgggtctcgccttggggactcccagcttgtgaagctcaatgttgacagc
aatgaacaaggctcctatgtagtggccatggaaacctttaccaatttaggacccattgtg
gatatgtgtgtggtggacctggagaggcaggggcagggacagctggttacttgctctggg
gctttcaaggaaggttccttgcggatcatccggaatggaatcggaatccatgagcatgcc
agcattgacttaccaggcatcaaaggtctgtggccactgcggtctgacccaaaccgggag
actgatgacactttggtgctctcttttgtgggccagacaagagtcctcatgttaaacgga
gaggaagtggaagaaaccgaactgatgggttttgtggatgatcagcagactttcttctgt
ggcaacgtggctcatcaacaactcatccagatcacttcagcatctgtgagattggtctct
caggaacccaaagctctggtcagtgagtggaaggagcctcagggcaagaacatcagtgtg
gcctcctgcaacagcagccaggtggtagtagctgtgggaagggccctctactacttgcag
atccatcctcaggagctccgacagatcagccacacagagatggaacatgaagtggcctgc
ttggacatcacgccactgggagacagcaatgggctgtcccctctttgtgccattggcctg
tggacagacatctctgcacgtatcttgaagctgccgtcttttgagctgctgcacaaagag
atgctgggtggagagatcattcctcgttccatcctgatgaccacttttgagagtagccac
tatctcctttgtgccttgggagatggggcacttttctacttcgggctcaacattgagaca
ggcctgttgagcgaccgtaagaaggtgactctgggcacacagcccacggtattgaggact
ttccgttctctttctaccaccaacgtctttgcttgctctgaccgccccactgtcatctac
agcagcaaccacaagttggtcttttccaatgtcaacctcaaggaggtcaactacatgtgt
cccctcaactctgatgggtatcctgacagcctggcactggccaacaacagcactctcacc
attggcaccatcgacgagatccagaaactgcacatccgcacagttcccctctatgagtct
cccaggaagatctgctatcaggaagtgtcccagtgctttggggtcctctccagccggatc
gaagtccaagacacaagtggcggcacaacggccctgaggcccagtgctagcacccaggcc
ctgtccagcagcgtcagctccagcaagctattctccagcagcacagcaccgcatgagacc
tcctttggagaagaggtggaggtgcacaatcttctcatcattgaccagcatacctttgaa
gtgcttcatgcccaccagtttctgcagaatgagtatgctctaagcctggtctcctgcaag
ctgggcaaagaccccaacacgtacttcattgtgggcacagccatggtgtatcccgaagag
gcagagcccaagcaaggtcgaattgtggtctttcagtattctgacggaaagctacagact
gtggccgagaaggaagtgaaaggagctgtgtactctatggtggaatttaatgggaagctc
ttagccagcatcaacagcacggttcggctttatgagtggacaacagaaaaggagcttcgc
actgagtgcaatcattacaacaatatcatggccctctacctgaagaccaagggcgacttc
atcctggtgggtgacctgatgcgatcagtgctgctgcttgcctacaagcccatggagggg
aactttgaagagattgctcgagacttcaatcccaactggatgagtgctgttgaaatcttg
gatgatgacaatttcctgggagctgaaaatgcttttaacttgtttgtgtgtcagaaggat
agtgctgccaccactgatgaggagcggcaacacctccaggaggtcggtctcttccatctg
ggtgaatttgtcaacgtcttttgccatggctctctggtcatgcagaatctgggcgagact
tccactcctacacagggctcagtgctctttggcacagtcaatggcatgattgggctggtg
acctcgctgtcagagagctggtacaacctcctgttggatatgcagaatcgactcaataaa
gtcatcaagagtgtgggcaagattgagcactccttctggagatcctttcatactgagcga
aaaacagaaccagccacgggcttcattgatggagacttgattgagagtttcctggacatc
agccggcccaagatgcaggaggttgtggcaaacctgcagtatgatgatggcagcgggatg
aagcgagaggccactgcagatgacctgatcaaagttgtggaggagctgacacggatccat
tag

DBGET integrated database retrieval system