Vagococcus lutrae: M2919_00590
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Entry
M2919_00590 CDS
T08219
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
vlu
Vagococcus lutrae
Pathway
vlu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vlu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M2919_00590 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vlu03400
]
M2919_00590 (mutM)
Enzymes [BR:
vlu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
M2919_00590 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
M2919_00590 (mutM)
DNA repair and recombination proteins [BR:
vlu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M2919_00590 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
DZR
Motif
Other DBs
NCBI-ProteinID:
UQF11861
LinkDB
All DBs
Position
116256..117083
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AA seq
275 aa
AA seq
DB search
MPELPEVESVRTGLEQLVVNKTIESVSVMWPKIIETTDIEKFKLALIGESIEAILRRGKF
LIIRLTHFDLISHLRMEGKYEFHQSDDPLMKHTHVVFHFNDGTELRYLDVRKFGRMALID
KHQAEEYRGIKKLGPEPVLPDFNLTVFEEQLGRRVKAIKPLLLDQHLVTGLGNIYVDEAL
YQARIHPEQPANTLTKVEIEVLHGAIIEVLARAVAAGGTTIRTYKNALGEAGKFQVALKV
YGQTGQACDRCQTPIKKIKVAQRGTHFCPKCQILH
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaggtagaatctgtcagaacaggcttagaacagttagttgtcaat
aaaacgattgagtctgtgagcgtgatgtggcctaaaattatagaaacaaccgatattgaa
aaatttaaactagcattaataggtgagtcaatcgaagctattttaagaagaggcaagttt
ttaattattcgtttgacacacttcgatttgatttctcatttaagaatggaaggaaagtat
gaatttcatcaatctgatgacccgttaatgaaacatacgcatgtggtgtttcattttaat
gatggcacggaattgcgctatttagatgtcagaaaatttggtcggatggcgcttatcgac
aagcaccaagcagaagaatatcgtgggattaaaaaactaggtccagaaccagtgttacct
gattttaaccttactgtttttgaagaacagctagggcgacgtgtaaaagcgattaagcca
ctattattagatcagcatcttgttactgggttgggaaatatatacgtagatgaagcctta
tatcaagcacgtattcatccagaacaaccagctaatacgttgacaaaagttgagatagaa
gtcttacacggtgcgataattgaagtgctagcgcgagccgtagcagcaggtgggacgacg
attcgaacgtataaaaatgctctgggggaagcgggaaaatttcaagtagcgcttaaagtt
tatggacagacggggcaggcttgtgaccgatgtcaaacacctatcaagaaaataaaagtg
gcacagagagggacacatttttgtccgaagtgtcaaatacttcattag
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