Vagococcus lutrae: M2919_01375
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Entry
M2919_01375 CDS
T08219
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vlu
Vagococcus lutrae
Brite
KEGG Orthology (KO) [BR:
vlu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vlu03016
]
M2919_01375 (truB)
Enzymes [BR:
vlu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
M2919_01375 (truB)
Transfer RNA biogenesis [BR:
vlu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M2919_01375 (truB)
Prokaryotic type
M2919_01375 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
UQF12005
LinkDB
All DBs
Position
287369..288286
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AA seq
305 aa
AA seq
DB search
MDGIIALWKERGMTSHDCVFKLRKILQTKKIGHGGTLDPDVDGVLPIAVGKGTKTIEYLQ
THDKQYTGEITLGYSTTTEDISGDVVDITPILAPISEEEVDSVMASFIGTITQVPPMYSA
VRVNGKRLYEYAREGLSVERPQRQTTISCFERITPLSYNEEKQTVSWRFNVTCSKGTYVR
TLAVDTGKALGVAAHMSDLTRLASGGLTADKSYRLQDIQAMMEQNDSTFLLPIELAFEQF
QRLDLTSERYEDVRNGRFLAVSEYPSISLDAVVACYYHERIVAIYQQHPTKPAWLKPVKV
LRINE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggatggaattatagcgttatggaaagaacgcggcatgacgagtcatgattgcgtcttc
aaattaagaaaaattttgcagacaaaaaaaatcggacatggcgggacgttagacccagat
gttgacggtgttttaccgattgcggttgggaaaggcacgaaaactattgaatatttgcaa
acacatgataaacaatatacaggtgaaataacattaggatatagtacaacgacagaagat
atcagcggagatgtagttgatatcacaccgattttagcacctatttcggaagaagaagtc
gatagtgttatggcgtcatttattggaacgattacgcaagttccaccgatgtattcggca
gtacgtgtgaacggtaaacgtctttacgagtatgctcgtgagggtttatcagtcgaacga
ccccaacgtcaaacgacgatttcttgttttgagcgaattacaccactttcttataatgaa
gaaaaacaaacagtttcttggcgctttaacgtcacgtgtagtaaagggacgtatgtgcgc
acgctcgccgttgatacgggaaaagcgttaggagtagctgctcatatgtcagatttaacc
cgattggcaagtggtggcttgacagctgataaaagttatcgtttacaagatattcaagcg
atgatggagcaaaatgacagcacttttttactaccaatagaattggcctttgagcaattt
caacgtcttgacttaacaagtgagcgctatgaagatgttcgcaacggtcgttttctagca
gtctcagaatacccctctatctcgttagacgcagtggtggcttgttattatcatgaacga
atagtagctatttatcaacaacatccaactaaacctgcttggcttaagccggtgaaagtg
ttaagaatcaatgaataa
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