Vagococcus lutrae: M2919_01550
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Entry
M2919_01550 CDS
T08219
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
vlu
Vagococcus lutrae
Pathway
vlu02020
Two-component system
vlu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
vlu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M2919_01550 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
M2919_01550 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vlu03021
]
M2919_01550 (rpoN)
Transcription machinery [BR:
vlu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M2919_01550 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_23
HTH_3
HTH_17
Sigma70_r4_2
Fe_dep_repress
MarR
Sigma70_r4
HTH_38
DUF6033
LacI
HTH_12
Phage_terminase
CCDC50_N
HTH_Crp_2
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
UQF12037
LinkDB
All DBs
Position
326665..327999
Genome browser
AA seq
444 aa
AA seq
DB search
MKFGQQLSQQQKQVQKLAMTQTLQQSIQMLHYNTEDLFKFLESKALENPLLDVKITRDYA
EPTYKSRGYQGDDQEELNYLNQIPDNQTSLFEHLVEQIHLNYRDTYLRQLVFFLVEYIDV
NGYLTITLEDMMSQTGAEYLQALDALTLLQQLEPAGVGARDLQECLMLQIERDESAPSMA
YIVIEEHFEDFAHRRWEKIAKDYQISVSEIQKISDYIQLLTPNPGAGYGEVLSQTIYPDI
IVKVNDHQEIEVLSTKSGKPTVAFQSSYFERMAQVEDPEVQEYLNEKKAEFEWLKRSVEQ
RGDTILNVGTEIVKRQKSFFLDHSAPLVPMKLKEIAEVLNVHESTVSRAVNGKYLQTDAG
TFELRSFFTTGLSQGDDSQDDVSADSVQKEIARIIAEEDKRKPLSDQKIVSLLKEKDIEI
SRRTVAKYRDILAIPSSTKRKRFD
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttggtcaacaattatcccaacaacaaaaacaagtccaaaaactggcaatgact
caaacgttacaacaatcgattcagatgttgcattataatacagaagatttatttaagttt
ttagaatctaaagcattagaaaatcctcttttagatgttaagattactcgagattatgct
gaaccgacgtataaatctcgtggctatcaaggagacgaccaagaagagttaaactacctt
aatcaaattccagacaatcaaacatctttgtttgaacatctggttgaacagattcattta
aattatcgtgatacttatttacgtcagttagtcttcttcttagtcgagtatatcgatgtt
aatggttatttaacgattacgttagaagatatgatgtcacaaacaggagcagagtattta
caagccttagatgcgctgacgttattgcagcaattagaaccggcaggtgtcggggctaga
gatttacaagagtgtctcatgttgcaaattgaacgcgatgaatctgctcctagtatggct
tatattgtgatagaagaacattttgaagactttgctcatcgtcgatgggaaaagattgcg
aaagattatcaaatctctgtttcagaaattcaaaaaatatctgattatatccaattatta
acgcctaatccaggagctgggtatggagaagttctttcgcaaacgatatatccagacatt
attgtcaaagtaaatgatcatcaagagattgaggttttatcgacaaaaagtggcaagcca
actgttgcctttcagtcttcttattttgaacgaatggcacaagtcgaggacccagaagta
caagagtatttaaatgaaaaaaaggcagagtttgaatggttaaagcgtagcgtagagcag
cgtggcgacacgattttgaatgtcggaacagagattgttaagagacaaaaatctttcttt
ttagatcatagtgctcctttggttccgatgaaattaaaagaaattgctgaagtacttaac
gttcatgagtcaactgttagtcgagcagtgaatggcaagtatttacagacagatgcaggt
acatttgaattgcgctctttctttactaccggtttaagtcaaggggatgattctcaagat
gacgtgtcagctgacagtgtgcaaaaagaaattgctcgtataatagctgaagaagataaa
agaaaaccactatctgatcaaaaaattgtatccttactaaaagaaaaagatattgaaata
tcacgtcggacggttgcgaagtatcgtgatattctcgccattccttcgtctacaaagaga
aaacgatttgattaa
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integrated database retrieval system
