Vagococcus lutrae: M2919_02485
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Entry
M2919_02485 CDS
T08219
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
vlu
Vagococcus lutrae
Pathway
vlu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vlu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M2919_02485 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vlu03400
]
M2919_02485 (uvrB)
DNA repair and recombination proteins [BR:
vlu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M2919_02485 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M2919_02485 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
TrwB_AAD_bind
AAA_7
T2SSE
AAA_30
AAA_19
AAA_22
AAA_25
Oxidored_nitro
AAA
AAA_5
Motif
Other DBs
NCBI-ProteinID:
UQF12213
LinkDB
All DBs
Position
complement(518505..520499)
Genome browser
AA seq
664 aa
AA seq
DB search
MIEREENRQFQLVSNYQPNGDQPEAIKQLVTGLKNNKKEQILLGATGTGKTFTISNVIQE
VNKPTLVIAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASV
NDEIDKLRHSATSSLLERNDVIVVASVSCIYGLGDPNEYQAKVLSLREGMEIDRQELLER
LVTIQFERNDIDFQRGRFRVRGDVVEIFPASRDEHALRIEFFGDEIERIREVDALTGEIL
ADRKHVSIFPATHFVTDAAHMETSIEKIQAELKERLAELRANDQLLEAQRLEQRTNYDIE
MMREMGYCSGIENYSRHMDGREPGEAPYTLLDFFPEDFLIVADESHVSLPQIRGMYNGDQ
ARKKMLVDHGFRLPSALDNRPLRLEEFEKHVNQIIYVSATPGPYELERTDTVVEQIIRPT
GLLDPLIEVRPIMGQIDDLVGEINERVDRDERVFVTTLTKKMSEDLTDYLKELGMKVKYL
HSDIKTLERTELIRDLRLGEYDVLIGINLLREGLDVPEVSLIAILDADKEGFLRSERSLV
QTIGRAARNENGRVIMYADKITDSMKKAMDETARRREIQQTYNEEHGIVPKTIKKEIRDL
IRISKVAEEDESFSLVDNYANLDKSEKEKVMLEMEHEMKEAAKALDFERAATLRDALLEL
KGKR
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgattgaacgtgaagagaatagacagtttcaattagtttccaattatcagccaaatggc
gatcaaccagaagcaattaaacagctagtgacaggcttaaaaaacaataaaaaagaacaa
atattattaggtgcgactggaacaggaaagacttttactatttcaaatgttattcaagaa
gtaaataaaccaaccttggtcattgcacataataaaacgttagctggtcagctgtacagc
gaatttaaagagttttttcctaacaatgcagtcgagtattttgttagttattatgattac
tatcagccggaggcctatgttccaagtagtgatacatttatcgaaaaagatgcgagcgtg
aatgatgaaatagataaactgcgtcactcggcaacaagttcgttgttagaacgtaacgat
gtgattgtggtagcttcagtttcttgtatctatggattaggtgatccaaacgaatatcaa
gcgaaagttttatcacttcgagaaggtatggaaattgaccgccaagaattattagaacgt
cttgtaacgattcagtttgagcgcaatgatattgattttcaacgaggacgttttcgtgtc
cgtggagatgttgtcgagatttttccagcttctcgtgatgaacatgctttgcgcattgag
ttttttggagatgaaatcgagcgtattcgtgaagttgatgcgctaacgggagaaatatta
gccgatcgtaaacatgtttctatttttccagcgactcacttcgtaacggatgcagctcat
atggaaacgtcgattgaaaaaattcaagcagagttaaaagagcgattagcagagttaaga
gcaaacgaccagttgcttgaagctcaacgtttagaacaacggacgaattacgatattgaa
atgatgcgtgaaatgggatattgttcgggtattgaaaattactctcgtcatatggacgga
cgtgaaccgggagaagcgccttacaccttattagactttttcccagaagatttcctaatc
gtcgctgatgagtcgcacgtaagcttaccgcaaattcgtggtatgtataacggtgaccaa
gcacgtaagaaaatgttagttgaccacggttttcgtttgccaagtgctttggataaccgt
cccttgcgtttagaagagtttgagaaacacgtgaatcagattatttatgtttcagctaca
ccaggaccttatgaattagaaagaacggataccgttgtcgagcaaattattcgcccgact
ggtttattagatccgttaatcgaagttcgtccaattatggggcaaattgatgacctagtc
ggcgaaatcaatgagcgagttgaccgcgacgagcgggtgtttgtcacgactttaactaaa
aagatgtcggaagatttaaccgattacttgaaagaattagggatgaaagtcaaatattta
catagtgacattaagacgttagaaagaacagaattaattcgcgatttacgtttaggagaa
tacgatgtccttattggtattaacttactgcgtgaagggttggacgtgccagaagtttct
ttaatcgccatattagatgccgataaggaaggcttcttgagaagtgagcgttcgttagtt
caaacaatcggacgagccgcgcgtaatgaaaatggtcgcgtcatcatgtatgctgataaa
ataactgactcaatgaaaaaagcaatggacgaaactgctcgacgccgtgaaattcaacaa
acttataacgaagaacatggtattgtaccgaaaactattaaaaaagaaattcgcgattta
attcgcatttcaaaagtggcagaagaagacgaatcatttagcttagtagataactatgcg
aatttagataaatctgaaaaagaaaaagtcatgctggaaatggaacatgaaatgaaagaa
gcggccaaagcattagattttgaaagggcggctaccttgcgtgatgcattattagaatta
aaaggaaaaagatag
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integrated database retrieval system
