KEGG   Vagococcus lutrae: M2919_03925
Entry
M2919_03925       CDS       T08219                                 
Symbol
cas3
Name
(GenBank) CRISPR-associated helicase Cas3'
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
vlu  Vagococcus lutrae
Brite
KEGG Orthology (KO) [BR:vlu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vlu02048]
    M2919_03925 (cas3)
Enzymes [BR:vlu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     M2919_03925 (cas3)
Prokaryotic defense system [BR:vlu02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    M2919_03925 (cas3)
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD Cas3_HD Helicase_C HD
Other DBs
NCBI-ProteinID: UQF12478
LinkDB
Position
complement(828851..831052)
AA seq 733 aa
MKHYLAKSDGETIVEHTCQLIANLNELHALYPAINVNWELLSLACLHHDLGKMNPKFQVK
VHENRRTIEGELPHGLLSTGTIPNKKLRARGYSEAEVKILNYAVALHHERDMSDITTEDY
HRALEEMKEVAADFPYAALEMEICTIKPVSKRYFKINTTLKPSTIENYHDYVMLKGLLNR
LDYAASAHISVENPNDFLEDSLAQLHYEWNDLQQYMTRHQEQNVVVVAQTGLGKTEAGLL
WLGKAKGFFTLPLRTAINAIYQRVTEQIVTTSHDNRVGLLHSDTYQQYLLFEEKSEQMMD
IDEYETKTRQLSLPLTICTLDQLFDIAFRYPGYEQKLATLSYSKVIIDEIQMYSADLLAY
LIYGLKLITDYGGQFAILTATLSPYILDLLVREGLSFEMPSSPFLDEMLLHRHEVEVVSE
EISIERIVAHYNKNKLLVICNTVRKAREIYDELSDIINSEELYLFHSHFIKKDRTAKEQA
ILKFGQVDNTRSGIWVTTQVVEASLDVDFDILFTELSDLNSLFQRMGRCYRKRAWQTDVG
TNVYVYTGGKKRCSGVGFVVDKDIHQLSKEALNSVKGRLDERMKVALINQTYTLEKVEKT
SFYHDVANNLAYLKLLIEGQKDKKDVQKQFRNIHSYKVMPKPVYEANRLHVEKLIATLKR
RHHKELSATEKKKLTKEKRQARLMLEQYQVDIPAYLFQKGEWTGIEITPYETLLLFECEY
DAEKGLYLIIDDT
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgaaacactatttagcaaagtcggacggtgaaaccatcgtagaacatacctgtcaatta
attgccaatttgaatgagctacacgcattatatccggcaatcaacgttaattgggagtta
ttaagcttagcttgtttacatcacgatttaggaaaaatgaatccaaagtttcaggtaaaa
gtgcatgaaaatagacgtacgatagaaggggaactacctcatggtttattaagtacggga
accattcctaataaaaaactccgagcacgtggttattcagaagcagaagtaaagatttta
aactacgctgtggcccttcaccatgaacgagatatgagcgacattacgacggaagactat
caccgtgctttagaggagatgaaagaagtagcagctgactttccttatgctgcactcgaa
atggaaatctgcacgattaaacctgtttctaaaagatattttaaaatcaataccacacta
aaaccctcgacaattgaaaactatcacgattatgtcatgttaaagggattattaaaccgt
ttggattatgcagcgagcgctcatatatctgttgaaaatcctaatgatttcttagaagat
tctttagcacaacttcactatgagtggaatgatttacaacaatatatgacgcgtcatcaa
gagcaaaacgttgtggttgtcgcacagacgggattaggtaagacagaagcagggttacta
tggcttggaaaagctaaaggattttttacactgcccttaaggacggctatcaacgcaata
tatcagcgagtcacagaacaaatagtcacaacgtctcatgataatcgagtaggactactt
cattccgatacttatcagcaataccttttgtttgaagaaaaaagcgagcaaatgatggac
atcgatgaatatgaaactaagacacgtcaactctctttgccacttacgatttgcacgttg
gatcagctttttgatattgcttttagatatcccggctatgaacaaaaactcgctacgtta
tcctattcaaaagtcattattgatgaaattcaaatgtattctgctgatttacttgcctat
ttaatctatggtttaaaattaataacggactacggaggacaatttgctatactcacagcg
acgctatcgccatatattttagacttattagttagagaaggtctttcatttgaaatgcct
tcatccccttttttagatgaaatgcttttacaccgtcatgaagtcgaggtggtttcagaa
gagatatctattgagcgtattgtagcgcattataataaaaataagttattagtcatttgt
aataccgttcgcaaagcacgagagatatatgacgaactgagcgatattattaactcagaa
gagctgtacttatttcatagtcactttatcaaaaaagaccgtacggcaaaagaacaagcg
attttaaagtttgggcaggttgataacacaagaagtggcatctgggtgaccacgcaagta
gtggaagcgtctttggatgttgattttgatattttatttactgaactatcagacttgaac
agcttatttcaacgaatgggacgatgttatcgtaaaagagcttggcagacggatgtagga
acaaatgtctatgtgtatacgggtgggaaaaagcgatgtagcggcgttggttttgtagta
gataaagatattcatcagctttctaaagaggcactaaacagtgttaagggacgtttagat
gaacgaatgaaagtggcattgattaatcaaacttacacgcttgaaaaagtagaaaagact
agtttttaccatgatgtagctaataatctagcctatttaaagttgttgatagaaggacaa
aaagataagaaagacgtccaaaagcagtttcgaaatattcatagttataaggtaatgcca
aagcctgtttatgaagcaaatcggctccatgttgagaaactgattgcgacactgaaacgt
cgtcatcataaagagttatcggccactgaaaagaaaaagctaacaaaagaaaagcgtcaa
gcacgactaatgctggaacagtatcaagtagatatacctgcatatctttttcaaaaagga
gagtggacagggatagaaatcactccttatgaaaccttgttactctttgaatgtgagtat
gatgctgaaaaaggactttacctgataattgatgacacttag

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