Vagococcus lutrae: M2919_04300
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Entry
M2919_04300 CDS
T08219
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vlu
Vagococcus lutrae
Pathway
vlu03420
Nucleotide excision repair
vlu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vlu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M2919_04300 (pcrA)
03430 Mismatch repair
M2919_04300 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vlu03400
]
M2919_04300 (pcrA)
Enzymes [BR:
vlu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M2919_04300 (pcrA)
DNA repair and recombination proteins [BR:
vlu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M2919_04300 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
M2919_04300 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
EKR
Terminase_6N
ResIII
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UQF12547
LinkDB
All DBs
Position
complement(905349..907610)
Genome browser
AA seq
753 aa
AA seq
DB search
MPTRKSLLDGMNPQQQKAVLKTEGPLLIMAGAGSGKTRVLTHRIAYLIAEKGINPWNILA
ITFTNKASKEMKERVSQIIAGEGDSVWVSTFHSMCVRILRRDVDLIGYNSNFTIADPAEQ
LTLIKRIIREMNLDDKKFEPRQMLGKISQAKNELLTVEDYQQEQGSYIEDITAQVYANYQ
RELRKNQTVDFDDLIMLTIRLFNEHPEVLAYYQQKFQYIHVDEYQDTNHAQYTLVNLLAG
RFKNLCVVGDADQSIYGWRGADMQNILDFEKDYPDAAVILLEQNYRSTKNILQAANNVIQ
QNQNRKDKRLWTDNEQGEKISYYRGPTERDEGRFIVEKIQEEKQQNSRRNGDFAVLYRTN
AQSRVVEEMLMKANIPYKMVGGHKFYDRKEIKDLMAYLRLIANPMDSMSFERIVNEPKRG
IGATSIQKLREFAVMHDWSMLEAAQNVALTTISGKAARELANFAEMIVSLQKMAEFLSIT
EIVEQVLARSGYLDALTLQNNLEAQTRIENLEEFYTVTRAYDEEQAKAEVEETEEGQPLA
RFLSELALVSDLDTLEEGQTQVTLMTLHAAKGLEFPVVFLLGMEEGIFPLSRAMFEDDQL
EEERRLAYVGITRAEEKLYLTNALSRTLYGRTQNNPVSRFIHEINQELIEPVGNQASIVA
RQRQSPFMTKKSTIGHRPTRPETTVKKTTSVRQTGSEQRDWQPGDKAHHKVWGEGTIVSV
SGKGKEMELDVAFPQQGIKRLLAAFAPLTRPEK
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaagaaaaagtttattagatgggatgaacccgcagcagcaaaaggcggtgctt
aaaacagaagggcctcttttgatcatggcaggtgcaggaagtggaaagacacgagttttg
acacatcggattgcttatttgatagctgaaaaagggattaatccgtggaatattttagcg
attacctttactaataaagcgtcaaaagaaatgaaagaacgtgttagtcagattattgct
ggcgagggtgatagtgtttgggtatctactttccacagtatgtgtgtgagaattttacgt
cgtgatgtcgacctgattggttataatagtaattttacaattgcggatccagccgaacag
ttaacgttaattaagcgaattattcgcgagatgaacttggatgataaaaagtttgagccg
cgtcaaatgttgggtaaaattagtcaggctaaaaatgagttgttaacagtagaagattat
caacaagagcaaggcagttatatagaagatattaccgcgcaagtttatgctaactatcaa
cgagaattgcgtaaaaatcaaacggttgattttgatgacttaattatgctaacgattcgt
ttatttaatgaacaccctgaagtgctagcttattatcaacagaaatttcaatatatccat
gtagatgagtatcaagatactaaccacgcgcaatatacattggttaatctattagcaggt
cgctttaaaaatctctgtgtagtaggggatgccgaccaaagtatttatggttggcgtgga
gcagatatgcaaaatattttagattttgaaaaagactatccggatgcagcggttatttta
ttagaacaaaattatcgttcgactaaaaatatcttgcaagcagctaataatgttatacaa
caaaaccaaaatcgaaaagataaacgtttgtggacggataatgagcaaggtgaaaaaatc
agctactatcgtgggccaacagagcgagatgaaggtcgctttatcgttgaaaaaattcaa
gaagaaaaacaacaaaacagccgccgaaatggtgatttcgctgtgctttaccggacaaat
gcgcaatctcgtgtggtagaagaaatgttaatgaaagcaaatatcccttataaaatggtt
gggggacataagttctacgaccgaaaagagattaaagacttaatggcttatttacgctta
atcgctaaccctatggactcgatgagttttgaacgtattgtgaatgagccaaagcgtggg
ataggtgcgacgtcgattcaaaaactacgagagtttgccgtcatgcatgattggtcgatg
ctggaagcagctcaaaatgtcgcgttgacgacgattagtggtaaggcagcacgtgaatta
gcaaattttgcggaaatgattgtttccttacaaaaaatggcggagtttttaagtattacc
gagatagttgaacaagtgctagcacgcagtggatacttagatgctctaaccttacaaaat
aatttagaagcgcagacgcgcattgaaaacttagaagagttttatacggtgacacgtgcc
tatgatgaagagcaagctaaagcagaagtagaggaaacagaagaaggccaaccgcttgca
cgttttctgagcgaattagcgcttgtatcggatttggatacgctagaagaaggtcagaca
caagttaccttaatgacgcttcatgcggcaaaagggttagaatttcctgtggtctttctc
ttaggtatggaagaagggattttcccactatcacgggcgatgtttgaagatgatcagcta
gaagaagagcgccgattagcgtatgttggcattactcgggcagaagaaaagctttattta
acgaatgctttatcacggacgctatacggacggacacaaaataatcccgtttcacgtttt
attcatgagattaatcaagagttgattgagcctgttggcaatcaagcgagtattgtcgcg
cgccaaagacaatcgccttttatgacgaaaaagtcaacgattggtcatcgcccaacacga
cctgaaacgactgtgaaaaaaacgacttcggtgcgtcaaacaggtagcgagcagcgagat
tggcaacctggcgacaaggcgcaccataaagtatggggtgaaggcacgattgttagcgtt
tcgggcaaaggaaaagagatggagttagatgttgcctttccacaacaaggcattaaacgt
ctattggctgcctttgcgccattaactcgaccggagaagtag
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