Vagococcus lutrae: M2919_06105
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Entry
M2919_06105 CDS
T08219
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vlu
Vagococcus lutrae
Pathway
vlu03420
Nucleotide excision repair
vlu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vlu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M2919_06105
03430 Mismatch repair
M2919_06105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vlu03400
]
M2919_06105
Enzymes [BR:
vlu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M2919_06105
DNA repair and recombination proteins [BR:
vlu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M2919_06105
MMR (mismatch excision repair)
Other MMR factors
M2919_06105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
AAA_22
AAA_30
UvrD_C
SLFN-g3_helicase
DEAD
NACHT
AAA_14
Phage_tudor
Osmo_CC
Cnl2_NKP2
Motif
Other DBs
NCBI-ProteinID:
UQF11080
LinkDB
All DBs
Position
complement(1281970..1284123)
Genome browser
AA seq
717 aa
AA seq
DB search
MSDEREWKLEEAYLDKVYNKLTETYQDVVQAAEHADQDSRQFIQGLSGDLRMSQDSVSDS
FESLIEVEQKNQELAQLNYKREWLAKQHHNVTQLMDSAYFAKLDVQYPDEEDVESFYIGV
AGFSDDHHEQYVYDWRSPIANLYYENNIGKTSYEAPVGTVPVDLKNRRQIRVERDRLLDF
FDTTTAIEDPMLLEVLNESSSAKLQDITSTIQREQNEIIRDTSSHVLIVEGIAGSGKTST
ILQRIAYLLYRYRDDLLPEQVLLLSPNPMFSQYIEEVLPSLGEKNPRQMTFRDLMKLKGR
HYPVETMAEQLENQTVRTDLTHMLTLESYVEKLTAKDIYFIPLKREEEVVISAEWMQETL
ASLPDSTEMYRRLEYVREQMLAQVERYIKTESKQAYWRDEVQDLSNEEYKQLFPKGMKGS
EDDNIERIAFKLLTKRFGNVRQRIQRYGWLDLERHYVEATGEALSLPLSLDQSTEFAYLH
YLLLRQRNERRVKYVIVDEVQDYSETQLYFLSKIFDQANFTLVGDGLQSIFVQGTSFDRM
APIFEGEGRRIKRMALKKSYRSSGPISQLMKHLAGGESSGIEVINRPGKNPVYVPLKNEQ
AYREYLQTFIAQREKNTRRVILTKTSEEAKTLYESLGRPHDLHVVTDTAAMNFSTKTMMM
PIHLAKGLEFDHVLIHDVSNNHYSDTQMARHLLYTASSRAMHELTLPFIAQLTELLK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagatgaacgcgaatggaaactagaagaagcctatttagataaagtttataataaa
ttaaccgagacctatcaagatgttgtacaagcagcagaacatgccgaccaagattcacga
caatttattcaaggcttatcaggtgatttgaggatgagtcaagactctgtttcagatagt
tttgagtcattaatcgaggttgaacaaaaaaaccaggaattagcacagttaaattataaa
cgggaatggttggcgaaacagcatcataatgtgacgcaattaatggattccgcttatttt
gctaaattagatgtgcagtatccagatgaagaagacgtagagtctttttatataggagtg
gcaggctttagtgatgatcatcatgaacaatatgtttatgattggcgatcaccgattgct
aacttatactatgaaaataatataggcaaaacgtcttatgaagcccctgtgggaacagtc
cctgttgatttaaaaaatcgtcgtcagattcgcgtggaacgtgaccggttgcttgatttc
tttgatacgacgaccgcaattgaagacccgatgttgttagaagttttaaatgagtcttct
tctgcaaaattacaagatattacaagcaccattcagcgcgagcaaaatgaaattattcgt
gatacatcgagtcacgtgctgattgttgaaggaattgcgggaagtggtaagacgtcgact
attttacagcgaatcgcttatttactataccgttatcgtgatgatttgctgccggagcaa
gttttgcttctgtcgcctaacccgatgtttagccaatatatcgaagaagtcttaccaagt
cttggtgaaaaaaatccgcgtcaaatgacgtttcgtgatttaatgaaactaaaaggacgg
cactatcctgttgagacgatggctgagcaactagagaatcagactgttcggacagatttg
acacatatgttgacattggaatcttatgtggaaaaattgacggcgaaagatatttatttt
atcccattaaagcgtgaggaagaggttgtaatttcggccgagtggatgcaggaaacactg
gcatccttgcctgatagtacggagatgtatcgtcgtttagaatacgtgcgtgaacaaatg
ttggcacaggtcgaacgatacatcaaaacagagagtaagcaagcatactggcgtgatgaa
gttcaagatttaagcaatgaagagtataagcaactatttccaaaagggatgaaaggtagt
gaagatgataatatcgagcggattgcatttaaactattgacgaaacgttttggtaatgta
cgtcagcgtattcaacgctatggctggttagatttagaacgtcactatgttgaagcaact
ggtgaggcattatctttaccgttatcacttgaccaaagtacagagtttgcttatctgcat
tatctattattacgtcagcgaaatgaacgacgggttaaatatgtgattgtagatgaagtg
caagattattcagaaacgcaactttatttcctatctaaaatatttgaccaagcgaacttc
acattagtgggagatggactacagtctatttttgtacagggaacatcttttgaccgcatg
gctccgatatttgaaggagaagggcgtcgtattaaacgaatggcgttaaaaaaatcctac
cgctcaagtggtccgattagtcagttgatgaaacacttagcaggtggcgaaagcagtggg
attgaagtgattaatcgtccgggtaagaatccggtctatgtacctttaaaaaatgagcaa
gcttatcgagaatatttacaaacgtttatcgcacagcgtgaaaaaaatacgcgtcgtgtc
atcttaacgaaaacaagtgaggaagccaaaacactgtatgaatcactcggacgtccacat
gatttacatgttgtcacagatacggcagcgatgaatttttcaacgaaaaccatgatgatg
ccgattcatttagcgaaaggattagagtttgaccacgtgctcattcacgatgtttcgaat
aatcactattcagatacacaaatggcaaggcacttactttataccgcaagttcgcgtgca
atgcatgaattaacactgccatttatcgcgcaacttactgagttattaaaatag
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