Vagococcus lutrae: M2919_06290
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Entry
M2919_06290 CDS
T08219
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vlu
Vagococcus lutrae
Pathway
vlu03030
DNA replication
vlu03430
Mismatch repair
vlu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vlu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M2919_06290
03430 Mismatch repair
M2919_06290
03440 Homologous recombination
M2919_06290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vlu03032
]
M2919_06290
03400 DNA repair and recombination proteins [BR:
vlu03400
]
M2919_06290
Enzymes [BR:
vlu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M2919_06290
DNA replication proteins [BR:
vlu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M2919_06290
DNA repair and recombination proteins [BR:
vlu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M2919_06290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
DEDDh_C
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
UQF11114
LinkDB
All DBs
Position
1317989..1318525
Genome browser
AA seq
178 aa
AA seq
DB search
MNFIALDFETANQKRHSACSIALVVVQDNQLVGRYYSLIQPQTDFHWRNIQVHGITPEMV
KDAPTFKEVWQDIEPLFQPEHLIVAHNAAFDNGVLRHTLAHHGLAQPYYQSLCTVTASRR
LMPELENHKLNTLCQAIGIPLEHHHHALDDAIASAQILLHLNQYFPTSELEKTVKIIS
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgaactttatcgcactggattttgaaacggctaaccaaaaacgtcatagcgcttgttcc
attgccttagtagtcgtacaagacaatcaactggtcggacgctactactcacttatccag
ccacaaaccgactttcattggcggaatattcaagtccacggcattacacctgagatggtc
aaagacgcaccgacgtttaaagaagtatggcaagatattgaacctctatttcaaccagag
cacttgattgtggcgcacaatgccgcctttgataatggtgtcttacgtcatactttggca
caccacggactagctcaaccatattatcaatctttatgtacggtaacggcgagcagacga
ctaatgcctgaactagaaaatcacaaactaaacacactttgccaagcaattggtattcct
ttagaacatcatcaccatgctttagacgatgcgattgccagtgctcaaattttattacat
ttaaatcaatacttccctacgagcgaattagaaaaaacggttaaaatcatcagttaa
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