Vagococcus lutrae: M2919_07425
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Entry
M2919_07425 CDS
T08219
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vlu
Vagococcus lutrae
Brite
KEGG Orthology (KO) [BR:
vlu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vlu03400
]
M2919_07425 (radA)
DNA repair and recombination proteins [BR:
vlu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M2919_07425 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
DUF7125
AAA_16
AAA_22
Lon_C
ABC_tran
AAA
DUF7129
nSTAND_NTPase5
SLFN-g3_helicase
AAA_14
RecA_N
nSTAND3
Rad51
NTPase_1
Zeta_toxin
GvpD_P-loop
Elong_Iki1
T2SSE
AAA_24
RUBY_RBDX
NACHT
DAP3
ATP-synt_ab
AAA_5
AAA_19
NPHP3_N
MCM
ATPase_2
KTI12
TIP49
AAA_18
AAA_30
NB-ARC
Zn_ribbon_RPB9
DUF7837
HypA
Motif
Other DBs
NCBI-ProteinID:
UQF11318
LinkDB
All DBs
Position
1547542..1548912
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AA seq
456 aa
AA seq
DB search
MAKKQRTQFECQACGYISPKYLGRCPNCGAWNEMMEVKIQEEPDRHSRVSLAGKRTTAKR
LTEVAMEKEPRVKTQMDELNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSQQLNQADGV
VLYVSGEESAEQIKMRAERLGIKGNDFYIYPETDMSQIRQTIEDLQPDYVIIDSIQTMMQ
PEIASASGSVSQVRETTAELMQIAKTNHIAIFIVGHVTKEGALAGPRMLEHMVDTVLYFE
GDRHHTFRILRAVKNRFGSTNEIGIFEMVESGLQEVLNPSEVFLEERLDGATGSAIVVSM
EGSRPILAEVQALVSPTLFGNAKRTATGLDYNRVSLIMAVLEKRAGLLLQNQDAYLKAAG
GVKLDEPAIDLAIAMSIASSYKDTGTSATECFIGEIGLTGEVRRVNRIDQRIREAQKLGF
KKVYVPKNNLHGYTPPADIEVVGIATLSEALRKVFP
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaaagcaacgtacacaatttgaatgtcaagcatgcggttacatttctcctaaa
tatttaggtagatgccctaactgcggtgcttggaatgaaatgatggaagtgaagatacaa
gaagaacctgaccgtcatagtcgcgtcagcctagctggcaagcgaacaacggctaagcga
ttaacagaagtcgcgatggaaaaagaaccccgtgtaaaaacacaaatggacgagcttaat
cgtgtgttgggtggtggcgttgttcccgggtcacttgttttaattggtggagacccagga
attgggaaatctacgttgttactacaagtttcgcaacagcttaatcaagctgatggcgta
gttttatacgtgtctggtgaggaaagtgccgagcagataaaaatgcgtgcggagcgttta
gggattaaaggcaatgatttttatatttatccagaaacagatatgtctcaaatacgtcaa
actatcgaagacttacaaccagactatgtcatcattgattccatccagacgatgatgcaa
ccggagatagccagtgcatcaggtagtgtgagtcaagtccgagaaacgactgctgagtta
atgcaaatcgctaaaactaatcatattgctatttttatcgtaggccatgtgacaaaggaa
ggcgccttagcaggtcctagaatgttagaacatatggtagatacggtgttgtattttgaa
ggggatcgtcatcatacctttcgaattttgcgagcggtaaaaaaccgttttggatcgaca
aatgagattgggatatttgagatggtggagtcgggattacaggaagtcttaaatccttct
gaagtcttcttagaagagcgattagatggtgcgactggctcggcgattgtggtgtcgatg
gaaggcagtcgtccgattttagcagaagttcaagctcttgtatctcctactttatttgga
aacgcaaagcggacagcgactgggttagattataaccgggtgtcactgattatggcagtg
ttagaaaaacgagccggtcttttgttgcaaaatcaagatgcgtatttaaaagctgctggt
ggtgttaagctagatgaaccggcgattgacttagccattgcgatgagtatcgcttcgagc
tacaaagatacgggaactagtgctaccgagtgttttattggcgaaattggtttgaccggt
gaagtacgacgggtgaatcggattgatcaacgcattagagaagctcaaaagttaggcttt
aaaaaagtgtacgtaccaaaaaacaatttacatggatatacaccgccagctgatattgaa
gtggttggaattgccaccttatcagaagcgctaagaaaagtttttccttaa
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