Vagococcus lutrae: M2919_07790
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Entry
M2919_07790 CDS
T08219
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vlu
Vagococcus lutrae
Pathway
vlu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vlu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M2919_07790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vlu03400
]
M2919_07790
Enzymes [BR:
vlu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
M2919_07790
DNA repair and recombination proteins [BR:
vlu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M2919_07790
Prokaryotic type
M2919_07790
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UQF11388
LinkDB
All DBs
Position
complement(1609338..1610051)
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AA seq
237 aa
AA seq
DB search
MFLSSDMIRTDWKTILADEFKQPYFSSLDQFLASEYQTQTIYPPKETIFQAFNLTPYDSV
KVVILGQDPYHGPKQAQGLSFSVSSDVAIPPSLKNIFKELHDDLNAPIPHQGDLSSWAQQ
GVLLLNTVLTVRKGEANSHRQKGWERLTDVAIQALNDHPRPIAFVLWGKPAQNKKELITN
DQHLILEAPHPSPLSSYRGFFGSKPFSTINHWLLSQKREPINWELPIDNSIQTISLF
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttcatcagatatgataaggacagattggaagactattcttgccgatgaattc
aaacaaccttacttttcatcgctcgatcagtttttagcatcagagtatcaaacacaaacc
atttatccacccaaagagacgattttccaagcttttaatttaacaccctatgacagtgtc
aaagtcgtaattttaggccaagacccttaccatggtcctaagcaagcacaagggttgagc
ttttctgtttcaagtgacgttgctatcccgccttctttaaaaaatatttttaaagaatta
catgacgatttaaacgcacctatccctcatcaaggtgatttatcctcatgggcacaacaa
ggcgtattgcttcttaatacggtcttaactgttcgtaaaggcgaagcgaactcacatcgt
cagaaaggctgggaacgcttgacggatgtggcgattcaagcactcaatgaccaccctcgt
ccgattgcctttgttttgtggggaaaacccgctcaaaataaaaaagaactgattacgaat
gatcagcatctcatcttagaagcccctcatccaagtcctctttcaagctatcgtggtttt
tttggttcaaaacctttttcgactatcaatcattggttactttcacaaaagcgagaacca
ataaattgggaactgcctattgataatagtatacaaactatttctttattttaa
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