Vagococcus lutrae: M2919_08835
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Entry
M2919_08835 CDS
T08219
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
vlu
Vagococcus lutrae
Pathway
vlu00521
Streptomycin biosynthesis
vlu00523
Polyketide sugar unit biosynthesis
vlu00541
Biosynthesis of various nucleotide sugars
vlu01100
Metabolic pathways
vlu01110
Biosynthesis of secondary metabolites
vlu01250
Biosynthesis of nucleotide sugars
Module
vlu_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
vlu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
M2919_08835 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
M2919_08835 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
M2919_08835 (rfbC)
Enzymes [BR:
vlu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
M2919_08835 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Rubella_E2
Motif
Other DBs
NCBI-ProteinID:
UQF11559
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Position
1834828..1835391
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AA seq
187 aa
AA seq
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MKVIKTTLEDALLIEPKVFGDHRGFFTESYNKETFAAAGIDIDFVQDNHSLSKEAGVLRG
MHYQLNDKAQTKLVRVTSGAIYDVIIDIRKGSPTYGKWEGFILSEHNHRQLLVPQGFAHG
FCTITENVNVQYKVDQVYSPEHDRGIAYDDPALAINWPMSQFILSEKDQHHPTLAEADNN
FIWEAKE
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgataaaaactactttagaagatgccctattaatcgaacccaaagtttttgga
gaccatcgagggttctttactgaatcgtataacaaagaaacatttgccgctgctggtatt
gatattgactttgttcaagacaatcattccttatcaaaagaagcaggcgtcttgcgcggt
atgcattatcaattaaacgataaagcacaaactaaattagtacgcgtgacatcaggagca
atctatgatgtcattatcgacattcgtaaaggttctcctacttacggtaagtgggaagga
tttatcttaagcgaacataatcaccgtcaactacttgtaccacaagggtttgcacatggt
ttctgtaccattacagaaaatgtgaacgtgcagtataaagtagaccaagtctattcgcca
gaacatgaccgcggtatcgcctacgatgatccagcattggcaatcaattggccgatgagt
caattcatcttatcagaaaaagaccaacatcatccgacattggcagaagcggataacaac
tttatttgggaggcaaaagagtaa
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