Vagococcus lutrae: M2919_09680
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Entry
M2919_09680 CDS
T08219
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
vlu
Vagococcus lutrae
Brite
KEGG Orthology (KO) [BR:
vlu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlu03019
]
M2919_09680
Messenger RNA biogenesis [BR:
vlu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M2919_09680
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Haemocyan_bet_s
tRNA_anti_2
DUF4771
Motif
Other DBs
NCBI-ProteinID:
UQF11718
LinkDB
All DBs
Position
2016294..2017232
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AA seq
312 aa
AA seq
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MKKLRELVVDETFEMFVLIKQADVRVAKNGKKFIAFTFQDASGSIDGKFWDASEEEIKRF
EAGKVVLLGGKREMYQNMPQIKILQMRLATETEPHHPSLYMEKAPVSREEMEEEINQTIF
EITNPTWNRIVRYILKQYAQSFFEHPAAKRHHHAYAGGLAFHTVSMLRVGKALAKQYPEI
NGPLLYAGILLHDIGKTVELSGPVSTEYTLVGNLVGHLVIMDEEITKACLALKIDEYSED
VIVLKHMVLAHHGKLEYGSPVRPQIMEAEILHQIDNLDASIQMMLGALKSIEPGERTERI
FGLDNRSFYLPH
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaagagaattagtcgtcgatgaaacatttgaaatgtttgtattgattaaa
caagccgatgtccgcgttgccaaaaacggcaaaaagtttatcgcgtttacgtttcaagat
gcttcaggtagtattgacggaaaattttgggatgcgtcagaagaagagattaaacgattt
gaagcaggtaaggtcgttctactaggtggtaaaagagaaatgtatcaaaacatgccacaa
attaaaattttacaaatgcgtctagcaacggaaacagagccacaccatccaagtctttat
atggaaaaagctcctgttagtcgcgaagagatggaagaggaaatcaatcaaactattttt
gagattacgaatcccacctggaatcggattgtgcgttacatattgaaacaatacgctcag
tcattctttgaacatccagcagctaaacgacatcaccatgcgtatgctggcggtttggct
ttccacacggtatcgatgttacgcgtagggaaagcactagctaaacaatatccagaaatc
aatgggccgttactctatgctggcatcttacttcatgacatcgggaaaacagtcgagtta
agtggtcctgtttcgacagagtatacattggtagggaatttagtaggtcatttagtgatt
atggatgaagaaattacgaaagcatgtttggctcttaaaattgatgaatatagcgaagat
gtgattgttttgaaacatatggttttagctcatcatggtaagttggaatacggttcgcca
gtcagaccgcaaattatggaagcagaaatcttacatcagatagataatttagatgcatct
attcaaatgatgttaggggcattaaaatcgattgaacctggagaaagaacggagcgaata
tttggtttagataatcgtagtttttacttaccacattaa
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