Micromonospora maris: VAB18032_00405
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Entry
VAB18032_00405 CDS
T01471
Name
(GenBank) AlkA domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vma
Micromonospora maris
Pathway
vma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VAB18032_00405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vma03000
]
VAB18032_00405
03400 DNA repair and recombination proteins [BR:
vma03400
]
VAB18032_00405
Enzymes [BR:
vma01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
VAB18032_00405
Transcription factors [BR:
vma03000
]
Prokaryotic type
Helix-turn-helix
AraC family
VAB18032_00405
DNA repair and recombination proteins [BR:
vma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VAB18032_00405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AEB47165
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Position
5766804..5768075
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AA seq
423 aa
AA seq
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MVGRAMRLIADGVVDRDGVPGLAARLGYTERHLHRMLRAELGAGPLALARAQRAQTARTL
IESTELGLAEIAFAAGFGSVRQFNDTIREVYGVPPSQLRAGRRTALGGSGTITLRLAYRP
PLHAPALLEFLALRTLPGIDEVRDGTYRRGLRLPHGTGAVALTPADGHVAATLRLTDLRD
LAPAVARCRHLLDLDADPVAVDQTLSADPALAAAVAAEPGVRVPHAVDGFEMAVRAITTQ
QVSLTSARTTLTHLLTTLYTPALKSVDQEVCVGDGAREDANLLINGAEGVSVGEEGVRVG
GFPAAEEVLRVPDEGFRMPAGRREAIRAVARAVVAGELDLEVGGERGEVARRLARVPGVG
PWTGGYIAMRALGDPDVFMPTDLAVRRGAAALGLPDSPAALDEYATRWRPWRSYAVVRLW
RAA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
gtggtgggccgggcgatgcggttgatcgccgatggggtggtggatcgggacggggttccc
gggttggccgcccggctcgggtacaccgaacggcacctgcaccggatgctccgggccgag
cttggtgccggtccgttggcgctggcccgcgcgcagcgcgcgcagaccgcccgtaccttg
atcgagagcactgagctgggtctggccgagatcgccttcgccgccgggttcggcagcgtc
cggcagttcaacgacacgatccgcgaggtgtacggggtacctccgtcgcagcttcgggcc
ggccggcgtacggcgctcggcgggtcgggcacgatcaccttgcggttggcgtaccgccca
ccgttgcacgctcccgcgctgctggaatttctggcgctgcgtaccctgccgggcatcgac
gaggtccgggacgggacgtaccgccgggggttgcggttgccgcacggcaccggcgcggtg
gcgctgaccccggcggacgggcatgtcgcggccaccctgcggctgaccgatctgcgtgac
ctggcgccggccgtggcccgctgccggcacctgctcgacctcgacgcggatccggtcgcc
gtcgaccagaccctcagcgctgatcctgccctggccgccgccgtggccgccgaacccggg
gtacgcgtcccccacgccgtcgacggcttcgagatggccgtccgcgccatcaccacccaa
caggtctccctcacctccgcccgcaccaccctcacccacctcctcaccaccctctacacc
cccgccctgaaaagtgttgatcaagaggtttgcgtcggggatggcgctcgggaagacgca
aacctcttgatcaacggggcggagggggtttccgtcggggaggagggggttcgggtgggg
ggttttccggcggcggaggaggtgttgcgtgtgccggatgaggggtttcggatgccggcg
gggcggcgggaggcgattcgggcggtggctcgggcggtggtggcgggtgagcttgatctg
gaggtgggtggggagcggggggaggtggcgcggcggttggcgcgggtgccgggggtgggg
ccgtggaccggcggttacatcgcgatgcgggcgctcggcgacccggacgtgttcatgccc
accgatctcgccgtgcgccggggcgccgccgccctcgggttgcccgactcccctgcggcc
cttgatgagtacgcgacccgctggcggccgtggcgctcgtacgccgtcgtccgactctgg
cgggccgcatga
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