Micromonospora maris: VAB18032_01005
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Entry
VAB18032_01005 CDS
T01471
Name
(GenBank) tRNA-pseudouridine synthase i
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vma
Micromonospora maris
Brite
KEGG Orthology (KO) [BR:
vma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vma03016
]
VAB18032_01005
Enzymes [BR:
vma01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
VAB18032_01005
Transfer RNA biogenesis [BR:
vma03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VAB18032_01005
Prokaryotic type
VAB18032_01005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AEB47285
LinkDB
All DBs
Position
complement(5913904..5914734)
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AA seq
276 aa
AA seq
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MDERVRLRLDVAYDGTDFSGWAAQPDRRTVAGVLVQTLDLVLGAGTATGLTVAGRTDAGV
HASGQVCHLDLPVEVWREHEGRLLRRLARLLPGDVRVRAMTEVPATFDARFSATFRRYEY
RVTDAPWGAEPLRRHEVLAWPRPLDTDRLAAASAGLVGEHDFAAYCRRKENATTLREVTR
LDWRRDPDGILVATVQADAFCQAMVRSLVGAMLVAGDGRRPVEWPAGLLTRRERSSEVTV
APAHGLTLVAVGYPDDPAEYARRAEATRRLRVPADA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtggacgagcgggtccggctacggctggatgtcgcgtacgacggcacggacttctccggc
tgggccgcccagccggatcggcgtacggtcgccggggtcctggtgcagacgctggatctg
gtgctcggcgcgggcaccgcgaccgggttgacggtggccggccgtaccgacgccggggtg
cacgcctccgggcaggtctgccacctcgacctgcccgtcgaggtgtggcgcgagcacgag
ggccggctgctgcgccggctggcccggctgctgccgggtgacgtgcgggtacgggcgatg
accgaggtgccggccaccttcgacgcccgcttctccgccaccttccggcggtacgagtac
cgggtcaccgacgccccgtggggtgccgagccgttgcgtcgacacgaggtgctggcctgg
ccgcgcccgctggacaccgatcggctcgccgccgcctccgccgggctggtgggggagcac
gacttcgcggcgtactgccggcgcaaggagaacgccaccacgttgcgggaggtgacccgg
ctggactggcggcgtgacccggacgggatcctggtcgccaccgtgcaggccgacgcgttc
tgccaggcgatggtgcgcagtctggtcggcgcgatgcttgtcgccggggacggccgccga
ccggtggagtggccggccggcctgctgacgcggcgggaacggtccagcgaggtgaccgtg
gcgcccgcgcacgggttgaccctggtggcggtgggctacccggacgatccggccgagtac
gcgcgccgtgccgaggcgacccgacggttgcgggtgccggccgacgcctga
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