Micromonospora maris: VAB18032_06545
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Entry
VAB18032_06545 CDS
T01471
Name
(GenBank) helicase domain-containing protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
vma
Micromonospora maris
Pathway
vma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VAB18032_06545
09124 Replication and repair
03420 Nucleotide excision repair
VAB18032_06545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vma03021
]
VAB18032_06545
03400 DNA repair and recombination proteins [BR:
vma03400
]
VAB18032_06545
Enzymes [BR:
vma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VAB18032_06545
Transcription machinery [BR:
vma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
VAB18032_06545
DNA repair and recombination proteins [BR:
vma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
VAB18032_06545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
AEB42433
LinkDB
All DBs
Position
complement(421731..423410)
Genome browser
AA seq
559 aa
AA seq
DB search
MSGGPLIVQSDKTLLLEIDHPDAQACRMAIAPFAELERSPEHVHTYRLTPLGLWNARAAG
HDAEGVVDALIKYSRYPVPHALLVDVAETMDRYGRLQLANDPVHGLVLRALDRVVLIEVA
KSKKLAGMLGAKLDDDTIAVHPSERGRLKQALLKLGWPAEDLAGYVDGEAHPIELAESGK
DGGKPFTLRSYQREAVEAFWAGGSGVVVLPCGAGKTLVGAAAMAEAKATTLILVTNTVAG
RQWKRELIARTSLTEDEIGEYSGERKEIRPVTIATYQVLTSRRGGAFTHLDLFGARDWGL
VVYDEVHLLPAPIFRFTADLQARRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIES
QGWIAPAQCTEVRVTLTDAERMAYATAEAEERYRMAATARTKLPVVKALVDRHPEEQTLV
IGAYIDQLHQLGEYLDAPIVQGSTTNKERERLFDAFRDGSLRTLVISKVGNFSIDLPEAA
VAIQVSGTFGSRQEEAQRLGRVLRPKADGRQAHFYTVVSRDTIDTEYAAHRQRFLAEQGY
AYTIVDADDVLGPTLPSFD
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggtggacccctgatcgtgcagtcggacaagacgctgctgctggagatcgaccac
cccgacgcgcaggcctgccggatggccatcgcgcccttcgccgagctggaacgctccccc
gagcacgtgcacacctaccggctgaccccgctcgggctgtggaacgcccgcgccgccggc
cacgacgccgagggcgtggtggacgctctgatcaagtactcccgctacccggtgccgcac
gccctgctggtcgacgtggccgagaccatggaccggtacggccgactccaactcgccaac
gacccggtgcacgggctggtgctgcgcgccctggaccgggtggtgctgatcgaggtcgcc
aagagcaagaagctcgccgggatgctcggcgccaaactcgacgacgacacgatcgccgta
cacccgtccgaacgcggccgactcaagcaggccctgctcaagctcggctggccggcggag
gacctggccgggtacgtcgacggcgaggcgcacccgatcgagctggccgagtccggcaag
gacggcggcaagccgttcacgctgcggtcgtaccagcgggaggcggtggaggcgttctgg
gccggcggctcgggcgtggtggtgctgccctgcggggccggcaagacgctcgtcggtgcg
gcggcgatggccgaggcgaaggcgaccacgctgatcctggtcaccaacaccgtcgccggt
cgacagtggaagcgcgaactgatcgcccgcacctcgctgaccgaggatgagatcggcgag
tactccggcgagcgcaaggagatccggccggtcaccatcgccacgtaccaggtgctgacc
tcgcgtcgcggcggcgcgttcacccacctggacctgttcggggcccgtgactggggcctg
gtcgtctacgacgaggtgcacctgctgcccgcgccgatcttccgcttcacggccgacctg
caggcccgtcgccggctcgggctgaccgcgaccctggtccgagaggacggccgggagggc
gacgtgttcagcctgatcggcccgaagcgctacgacgcgccctggaaggacatcgagtcg
cagggctggatcgccccggcccagtgcaccgaggtcagggtcaccctgaccgacgccgag
cggatggcgtacgcgaccgccgaggccgaggagcgttaccggatggcggccaccgcccgc
accaaactgccggtggtgaaggcacttgtggaccggcatccggaggagcagaccctggtc
atcggtgcgtacatcgaccagttgcaccagctgggcgaatacctggacgcaccgatcgtg
caggggtcgacgaccaacaaggagcgcgagcggttgttcgacgcgttccgtgacgggtcg
ctgcgtaccttggtgatctcgaaggtggggaacttctccatcgacctgcccgaggcggcg
gtggcgatccaggtgtcgggcaccttcggctcccggcaggaggaggcgcaacggctgggc
cgggtgctgcggccgaaggccgacggccggcaggcgcacttctacacggtcgtctcccgg
gacaccatcgacaccgagtacgccgcccaccgccagcgattcctcgccgagcaggggtac
gcgtacaccatcgtcgacgccgacgacgtcctaggcccgaccctcccctccttcgactga
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