Micromonospora maris: VAB18032_06615
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Entry
VAB18032_06615 CDS
T01471
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
vma
Micromonospora maris
Brite
KEGG Orthology (KO) [BR:
vma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vma03016
]
VAB18032_06615
Enzymes [BR:
vma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
VAB18032_06615
Transfer RNA biogenesis [BR:
vma03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
VAB18032_06615
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AEB42447
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All DBs
Position
436330..436902
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AA seq
190 aa
AA seq
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MRLFIAVYPPAEAIGHLFSEVAGLRLSAAAAAGTNVRLVDPGKAHLTLAFLGEVDPTRLT
AVQQALRLAVATAGGGPPPMLRLGGGGRFGPGRSTVLWVDVHGDVDRLAALVGEVRGGLA
AIGVPSDDKPFRPHLTIARPGDRMPPHDVEADLAVLDNYLGPPWPATELVLVHTHPGPPP
THHPLTTYPL
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtgcgactcttcatcgcggtctatccgcctgccgaagcgatcgggcacctgttcagcgag
gtcgccgggctgcggctcagcgcggcggcagccgccggaacgaacgtacggctggtcgac
cccggtaaggcccacctcacgctcgcctttctcggcgaggtcgatcccacccggctgacc
gccgtgcagcaggccctacggctcgccgttgccacggccggtggcggtccgccgcccatg
ctgcggctgggtggcggcggccgattcgggccgggccgcagcaccgtactctgggtcgac
gtgcacggcgacgtcgatcgcctggcagcgttggtcggagaggtccgcggcggactggcc
gcgatcggggtgcccagcgacgacaagccgttccgcccgcacctgaccatcgcccgcccc
ggcgaccggatgccaccccacgacgtcgaagccgacctggccgtactcgacaactacctc
ggcccaccctggcccgccaccgaactggtactggtccacacccaccccggccccccaccc
acccaccaccccctcaccacctaccccctctaa
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