Micromonospora maris: VAB18032_11995
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Entry
VAB18032_11995 CDS
T01471
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vma
Micromonospora maris
Brite
KEGG Orthology (KO) [BR:
vma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vma03016
]
VAB18032_11995 (truB)
Enzymes [BR:
vma01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VAB18032_11995 (truB)
Transfer RNA biogenesis [BR:
vma03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VAB18032_11995 (truB)
Prokaryotic type
VAB18032_11995 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
DUF2244
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AEB43513
LinkDB
All DBs
Position
1613353..1614237
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AA seq
294 aa
AA seq
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MSTDGLIVVDKPGGMTSHDVVARLRRLARTRRVGHGGTLDPMATGVLVIGVGRATRLLTY
VIGADKTYAATIRLGQSTVTDDAEGDVISTAPAGGVTDEAIRAALAALTGEIDQVPSAVS
AIKINGQRAYKRVRDGESVDLPARRVTVSRLDVLAIRRDQPDLVDVDVEVACSTGTYIRA
IARDAGLALQVGGHLTALRRTAVGGFTLAEAATLDELEQRAPEVVDLPLAAAAARFFTRR
DASPDEAKVLSHGGPLDAVGHAGPYAVFDPAGQLIAIVSERAGRARAEIVLAPA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacagacggtctgatcgtggtggacaagccgggcggcatgacgtcgcacgatgtg
gtggcgcggctgcgccgcctcgcgcgtacccggcgggtgggccacggaggcaccctcgat
ccgatggccaccggcgtgctggtgatcggggtggggcgggcgacccgcctgctgacgtac
gtgatcggtgccgacaagacgtacgccgccaccatccggttggggcagtccaccgtcacc
gacgatgcggaaggcgacgtgatctccaccgcacccgccggtggcgtgaccgacgaggcg
atccgcgccgccctggccgcgctgaccggcgagatcgaccaggtgccgagcgcggtcagc
gccatcaagatcaatgggcagcgggcgtacaagcgggtccgggacggcgagagcgtcgac
ctgcccgcccggcgggtcaccgtgtcccggctggacgtcctggcgatccgacgcgatcag
cccgacctggtggacgtcgacgtcgaggtggcctgctcgaccggcacgtacatccgggcg
atcgcccgggacgcgggcctggcgctacaggtcggcgggcacctcaccgccctgcggcgt
accgctgtgggcggtttcaccctggccgaggccgccaccctcgacgagctggagcagcgg
gcgcccgaggtggtcgatctgccgctggcggcggcggccgcccggttcttcacccgccgg
gacgccagcccggacgaggcgaaggtgctctcccacggcggaccactcgacgcggtcggc
cacgccgggccgtacgcggtcttcgatccggccggccagttgatcgctatcgtcagcgag
cgggccggtcgggcccgcgcggagatcgtgctcgccccggcgtga
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