KEGG   Micromonospora maris: VAB18032_12570
Entry
VAB18032_12570    CDS       T01471                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
vma  Micromonospora maris
Brite
KEGG Orthology (KO) [BR:vma00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    VAB18032_12570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vma03021]
    VAB18032_12570
Transcription machinery [BR:vma03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     VAB18032_12570
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_20 Sigma70_r1_1 CDC27
Other DBs
NCBI-ProteinID: AEB43628
LinkDB
Position
complement(1737963..1739570)
AA seq 535 aa
MTEPRQTGADVRSLTDTLIAHAQSAGGQLTSAQLARTVESAEVTPAQAKKILRALSEAGV
TVVVDGSASTRRRVAAARSATPASRATTAKTTKKAAPPAPKQAPAAEEATAPAPRKATSR
KTTGTTAEVAAKAAVPAKKSTRATKATVAAASAAKPTKAAGKAKGEGAEGDVDPEELAAE
IEDVVVEEPAELAQAAEADAASSASDNDFEWDDEESEALKQARRDAELTASADSVRAYLK
QIGKVPLLNAEQEVELAKRIEAGLYAAERLRAAEEGEEKLARDMQRDLLWISRDGERAKN
HLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQ
AITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEI
QQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFSLLQDQLQQVLQTLSEREAG
VVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1608 nt   +upstreamnt  +downstreamnt
gtgacagaaccccgccagaccggcgccgacgttcgctcgctcaccgacaccctgatcgcc
cacgcgcagagcgccggcggccagctcacgtcggcccagctcgcgcgcaccgtcgagtcc
gccgaggtgactccggcccaggccaagaagatcctgcgggcgctctccgaggctggagtg
accgtggtggtcgacggctcggccagcacccgccgtcgggtcgccgccgctcgctccgcg
accccggcctcccgcgccaccaccgccaagaccaccaagaaggcggcaccgcctgccccg
aagcaggcgcccgcggccgaggaggccaccgcgccggcgccccgtaaggcgacctcgcgc
aagaccaccggcaccacggccgaggtggccgccaaggccgccgtaccggccaagaagtcc
acccgggccaccaaggcgacggtggccgccgcgagcgcggcgaagcccaccaaggcggcc
ggcaaggccaagggcgagggcgccgagggcgacgtcgaccccgaggaactcgccgccgag
atcgaggacgtggtggtcgaggagccggccgagctggcccaggctgccgaggccgacgcg
gcgagctccgccagcgacaacgacttcgagtgggacgacgaggagtccgaggccctcaag
caggcccgccgggacgccgagctgaccgcctcggccgactcggtccgggcgtacctcaag
cagatcggcaaggttccgctgctcaacgcggagcaggaggtggagctggccaagcggatc
gaggccggcctctacgccgccgagcgtctgcgggccgccgaggagggcgaggagaagctc
gcccgcgacatgcagcgtgacctgctctggatctcccgcgacggcgagcgggcgaagaac
catctgctggaggccaacctccggctggtcgtctcgctcgcgaagcgctacacgggtcgt
ggcatggccttcctcgacctcatccaggaaggcaacctcggcctcatccgcgccgtcgag
aagttcgactacaccaagggctacaagttctccacctacgccacctggtggatccgccag
gccatcacccgcgccatggccgaccaggcccgcaccatccgcatcccggtgcacatggtc
gaggtgatcaacaagctgggtcggatccagcgcgagctgctccaggatctgggccgcgag
cccaccccggaggagctggccaaggagatggacatcacaccggagaaggtgctggagatc
cagcagtacgcccgggagcccatctcgctcgaccagaccatcggcgacgagggcgacagc
cagctcggtgacttcatcgaggattccgaagctgtggtggcggtcgacgcggtttccttc
tcgctgctgcaggatcagctccagcaggtactccagacgttgtccgagcgtgaggcgggt
gtggtacgcctgcggttcggtctgaccgacgggcaaccgcgcacgctggacgagatcggg
caggtctacggcgtgacccgcgagcgcatccgacagatcgaatccaagaccatgtccaag
ctgcgccacccgtcccgttcccaggtactccgcgactacctcgactga

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