Micromonospora maris: VAB18032_12570
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Entry
VAB18032_12570 CDS
T01471
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
vma
Micromonospora maris
Brite
KEGG Orthology (KO) [BR:
vma00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
VAB18032_12570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vma03021
]
VAB18032_12570
Transcription machinery [BR:
vma03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VAB18032_12570
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
Sigma70_r1_1
CDC27
Motif
Other DBs
NCBI-ProteinID:
AEB43628
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Position
complement(1737963..1739570)
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AA seq
535 aa
AA seq
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MTEPRQTGADVRSLTDTLIAHAQSAGGQLTSAQLARTVESAEVTPAQAKKILRALSEAGV
TVVVDGSASTRRRVAAARSATPASRATTAKTTKKAAPPAPKQAPAAEEATAPAPRKATSR
KTTGTTAEVAAKAAVPAKKSTRATKATVAAASAAKPTKAAGKAKGEGAEGDVDPEELAAE
IEDVVVEEPAELAQAAEADAASSASDNDFEWDDEESEALKQARRDAELTASADSVRAYLK
QIGKVPLLNAEQEVELAKRIEAGLYAAERLRAAEEGEEKLARDMQRDLLWISRDGERAKN
HLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQ
AITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEI
QQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFSLLQDQLQQVLQTLSEREAG
VVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
gtgacagaaccccgccagaccggcgccgacgttcgctcgctcaccgacaccctgatcgcc
cacgcgcagagcgccggcggccagctcacgtcggcccagctcgcgcgcaccgtcgagtcc
gccgaggtgactccggcccaggccaagaagatcctgcgggcgctctccgaggctggagtg
accgtggtggtcgacggctcggccagcacccgccgtcgggtcgccgccgctcgctccgcg
accccggcctcccgcgccaccaccgccaagaccaccaagaaggcggcaccgcctgccccg
aagcaggcgcccgcggccgaggaggccaccgcgccggcgccccgtaaggcgacctcgcgc
aagaccaccggcaccacggccgaggtggccgccaaggccgccgtaccggccaagaagtcc
acccgggccaccaaggcgacggtggccgccgcgagcgcggcgaagcccaccaaggcggcc
ggcaaggccaagggcgagggcgccgagggcgacgtcgaccccgaggaactcgccgccgag
atcgaggacgtggtggtcgaggagccggccgagctggcccaggctgccgaggccgacgcg
gcgagctccgccagcgacaacgacttcgagtgggacgacgaggagtccgaggccctcaag
caggcccgccgggacgccgagctgaccgcctcggccgactcggtccgggcgtacctcaag
cagatcggcaaggttccgctgctcaacgcggagcaggaggtggagctggccaagcggatc
gaggccggcctctacgccgccgagcgtctgcgggccgccgaggagggcgaggagaagctc
gcccgcgacatgcagcgtgacctgctctggatctcccgcgacggcgagcgggcgaagaac
catctgctggaggccaacctccggctggtcgtctcgctcgcgaagcgctacacgggtcgt
ggcatggccttcctcgacctcatccaggaaggcaacctcggcctcatccgcgccgtcgag
aagttcgactacaccaagggctacaagttctccacctacgccacctggtggatccgccag
gccatcacccgcgccatggccgaccaggcccgcaccatccgcatcccggtgcacatggtc
gaggtgatcaacaagctgggtcggatccagcgcgagctgctccaggatctgggccgcgag
cccaccccggaggagctggccaaggagatggacatcacaccggagaaggtgctggagatc
cagcagtacgcccgggagcccatctcgctcgaccagaccatcggcgacgagggcgacagc
cagctcggtgacttcatcgaggattccgaagctgtggtggcggtcgacgcggtttccttc
tcgctgctgcaggatcagctccagcaggtactccagacgttgtccgagcgtgaggcgggt
gtggtacgcctgcggttcggtctgaccgacgggcaaccgcgcacgctggacgagatcggg
caggtctacggcgtgacccgcgagcgcatccgacagatcgaatccaagaccatgtccaag
ctgcgccacccgtcccgttcccaggtactccgcgactacctcgactga
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