Micromonospora maris: VAB18032_13720
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Entry
VAB18032_13720 CDS
T01471
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vma
Micromonospora maris
Brite
KEGG Orthology (KO) [BR:
vma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vma03032
]
VAB18032_13720
03400 DNA repair and recombination proteins [BR:
vma03400
]
VAB18032_13720
Enzymes [BR:
vma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VAB18032_13720
DNA replication proteins [BR:
vma03032
]
Prokaryotic type
DNA Topoisomerases
VAB18032_13720
DNA repair and recombination proteins [BR:
vma03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VAB18032_13720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
LAGLIDADG_3
DNA_gyraseA_C
Intein_splicing
Motif
Other DBs
NCBI-ProteinID:
AEB43856
LinkDB
All DBs
Position
1988931..1992701
Genome browser
AA seq
1256 aa
AA seq
DB search
MARRKETKVDHSAFDRAGARVFDNPLVTEVSDSYLEYAFSVIHSRALPDARDGLKPVHRR
ILYAMYESGFRPDRAHVKSARVVGDVMGRYHPHGDTAIYDAMVRMAQDFSLNVPLIDGHG
NFGSPDDGPAAARYCVTGDTRIRLADGSSPRIGELVDLAPDSEADVDFEVLDKDGKAVRA
SKVFNSGVHPTIQIRTEAGFSLRGSENHLVLCLEAPLGVPVFQWRRLDEVAPDTVVCIAR
NAWYQVTPTAREYMLGVLGGAWVSEGFASESRAGFNNTDEHFFGEVLHAYDQVVGGQRYV
SERHTRRDRKRIQELDVQEYAGGMAAFRASPLAELIGHQARDKFVPQFVWTGGWGVKRAF
LTALFEGDGGVRVAKDSFTIQYTSFSERLTRDVQELLAEFGVIACWRQYTRPSGSVEHRL
VISGMRNIAAFANRVGFLRTKQAVLHRVLKRSPLRPHRLSKDHAPFVAEYVRGALAFDRR
GSGRKWLTRHNFDRVERWETERLRIVDRIKDPEILATILPVMDSGYRFERITEVTPCEPA
EVYSIRVDTEDHSFLAGGFVNHNTEARMSREAMLLVGELGEETVDVEPNYDGSLTQPTVL
PAAFPNLLVNGTSGIAVGMATNMIPHNLGEVVSAARWLIRHPNATLDKLMEFVPGPDLPT
GGLLLGLDEVRRAYETGRGVVRMRGKVEIGPLEGSRGRQAITVVELPYGVGAEKVIAAIT
NEVTKTKRLTGIADVKDLTDRENGTRLVIECKVGVNPQALLADLYRLTPLEQSFGVNNLV
LVDGQPRTLGLKALLEVFLAHRYEVVTRRSAYRRRKRQERLHLVDGLLIALLDIDKVVKL
IRASEDAQAAKDGLMQKFKLSEIQASYILDTPLRRLTKYDRLELEAEQEKLRAEIAELST
ILDDENVLKKLVSDELAAVVKQFAAPRRTTLVDGDLKEVLAASAPAGPLEVADDPCQVIL
SATGLVARTAAESEEAAEGRRRHGRVKHDAVRAVVHSTARGRVLLVTSAGRAFKVDVLPL
PVLPEQAGTVSLRGGMSAAELVPLEPGESVVGLAPLGPTAEGSPGLALGTRQGVVKVCAP
DWPVRSDEFEVIGLRDGDEVVGATWLTDGAESLAFLTSAASLLRFPAGTVRPQGLKGGGM
AGVALPDGAQVVYFGAVRTDDPQHGEPMVVTSTGATVKVTPFAAYPAKGRATGGVRAQRF
LKGETDVVVAWIGPRPVGSTANGEPVELPTADPRRDGSGFAVMLGPTVIGHQIDRQ
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccgcaaggaaacgaaggtcgaccactccgcgttcgaccgggccggcgcgcgg
gtcttcgacaacccgctggtcaccgaggtctccgactcctacctggagtacgccttctcg
gtcatccactcccgcgccctgccggacgcccgcgacggcctcaagccggtgcaccggcgc
atcctctacgccatgtacgagtcgggcttccggcccgaccgggcgcacgtcaagtcggcc
cgcgtggtcggtgacgtgatgggccgctaccacccgcacggcgacaccgcgatctacgac
gccatggttcggatggcgcaggacttctccctcaacgtcccactcatcgacgggcatgga
aattttgggagtccagacgatggaccggctgcggcgcgttactgcgtgacgggcgatact
cgaattcgcctggcggacggttcgagtcctcgaatcggcgagctggtggatctcgctccc
gatagtgaggctgacgtcgatttcgaggtgctcgacaaggacggcaaggccgtccgggca
agcaaggttttcaactcgggagtccatcccaccatccagatccgtaccgaagccgggttc
tcactccggggcagcgagaatcacctggtcttgtgcctggaagcaccgctcggcgtgcca
gtgttccaatggcgacgtctcgacgaggtggcccccgacacggtcgtctgcatcgcgcga
aacgcctggtaccaggtaacccctacggctcgggagtacatgctgggagtactcgggggt
gcctgggtatccgaagggttcgcgagtgagtcgcgagcgggcttcaacaatacggatgag
cacttcttcggcgaggttctgcatgcatacgaccaagtcgtaggcgggcagcgctacgtc
agcgagcggcatacccgccgcgaccgcaaacgcatccaggagctggatgtacaggagtat
gccggggggatggccgcgttccgtgccagcccgctagccgaactcatcggacatcaggcg
cgggacaagttcgttccgcagttcgtctggaccggagggtggggtgtgaagcgtgcgttc
ctgacggcgttgtttgaaggagacggcggcgtacgggtagcgaaggacagcttcaccatt
cagtacacgagcttcagtgaacgccttactcgggacgtccaagagttgttggcggagttc
ggcgtcatcgcgtgttggcggcaatatacgcgtccgagtggctcggtggagcatcgactg
gtcatttcagggatgcggaacatcgcggcgttcgccaatcgagtcgggttcctccgtacc
aagcaggctgtgctgcacagggtgctcaagcgttcaccgctgcgcccgcatcgactcagt
aaagaccacgcgcccttcgtggccgagtacgttcgtggggcgctcgccttcgacaggcgt
ggttcgggccgcaagtggctgactcggcacaacttcgaccgggtagagcgttgggagact
gaacggcttcgcatcgtcgatcggatcaaggatcccgagatcttggcgacgatcctgcct
gtgatggactcgggctaccgattcgagcggatcaccgaggtgaccccgtgcgagccggcc
gaggtctactcaatcagggtcgacacagaagaccactcattcctcgctggcggtttcgtc
aaccacaacactgaggctcgaatgtcgcgggaggcgatgctgctcgtcggcgagctgggt
gaggagaccgtcgacgtcgagcccaactacgacggctcgctgacccagcccaccgtgctg
ccggccgccttcccgaacctgctggtcaacggcacttccgggatcgcggtcgggatggcg
accaacatgatcccgcacaacctgggcgaggtcgtgtcggcggcgcgctggctgatccgg
cacccgaacgccaccctcgacaagctgatggagttcgtgcccggccctgacctgcccacc
ggtgggctgctgctcggcctcgacgaggtgcgccgtgcctacgagaccggccggggtgtg
gtgcggatgcgcggcaaggtggagatcggcccgctggagggcagtcggggtcggcaggcg
atcaccgtggtcgagttgccgtacggggtgggcgcggagaaggtcatcgcggccatcacc
aacgaggtcaccaagaccaagcggctgaccgggatcgccgacgtcaaggacctgaccgac
cgggagaacggcacccgcctggtcatcgagtgcaaggtcggggttaacccgcaggcgctg
ttggccgacctgtaccgcctcactccgctggagcagtccttcggtgtgaacaacctggtg
cttgtcgacgggcagccgcgcaccctggggctgaaggcgctgctggaggtgttcctggcg
caccgctacgaggtggtgacccggcgcagcgcgtaccgcaggcgtaagcgtcaggagcgg
ttgcacctggtcgacggtctgctgatcgcactgctggacatcgacaaggtggtcaagctg
attcgggccagcgaggacgcccaggccgcgaaggacggtctgatgcagaagttcaagctc
tccgagatccaggccagctacatcctggacaccccgctgcgtcggctgaccaagtacgac
cggctggagttggaggccgagcaggagaagctgcgtgccgagatcgccgagttgtccacc
attctggacgacgagaacgtgctgaagaagctcgtctccgacgagttggccgcggtggtc
aagcagttcgccgccccgcgtcggaccacgcttgtcgacggtgacctcaaggaggtgctc
gccgcctccgcgccggccgggccgctggaggtggccgacgacccgtgtcaggtgatcctg
tccgccaccggcctggtggcgcggaccgcggccgagtcggaggaggccgccgaggggcgg
cgccggcacggccgggtcaagcatgacgcggtacgcgcggtggtgcactccaccgcccgg
ggtcgggtgctgctggtgaccagcgccggtcgcgcgttcaaggtggacgtgttgccgttg
ccggtgttgccggagcaggcgggcacggtgtcgctgcggggtgggatgtccgcggccgag
ttggtgccgttggagccgggggagagcgtggtcggtctggcaccgctcggtccgacggcc
gagggttcacccggcctggcgttgggcacccgtcagggggtggtcaaggtgtgtgccccg
gactggccggtccgctccgacgagttcgaggtgatcgggctgcgtgacggcgacgaggtg
gtcggggcgacctggttgaccgacggtgccgagtccctcgcgtttttgaccagcgcggcg
tcgctgttgcgttttcccgctggcacggttcgcccgcaggggctcaagggtggcggcatg
gccggtgtcgccctgccggatggggcgcaggtggtgtacttcggtgcggtgcgcaccgac
gatccgcagcacggtgagccgatggtggtcacctccaccggcgccaccgtcaaggtgacg
ccgtttgcggcgtacccggcgaaggggcgggcgaccggcggggtgcgcgcgcagcggttc
ctcaagggtgagaccgacgtggtcgtcgcctggatcggtcctcggccggtgggctcgacg
gcaaatggtgaaccggtcgagctgccgaccgccgatccgcgtcgggacggttccggtttc
gccgtgatgctcggccccaccgtgatcggtcatcagatcgatcgccagtag
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