Micromonospora maris: VAB18032_14660
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Entry
VAB18032_14660 CDS
T01471
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vma
Micromonospora maris
Pathway
vma03030
DNA replication
vma03430
Mismatch repair
vma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VAB18032_14660 (dnaE)
03430 Mismatch repair
VAB18032_14660 (dnaE)
03440 Homologous recombination
VAB18032_14660 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vma03032
]
VAB18032_14660 (dnaE)
03400 DNA repair and recombination proteins [BR:
vma03400
]
VAB18032_14660 (dnaE)
Enzymes [BR:
vma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VAB18032_14660 (dnaE)
DNA replication proteins [BR:
vma03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VAB18032_14660 (dnaE)
DNA repair and recombination proteins [BR:
vma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VAB18032_14660 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AEB44044
LinkDB
All DBs
Position
2190226..2193759
Genome browser
AA seq
1177 aa
AA seq
DB search
MGDSFAHLHVHTEYSMLDGAARLKDLFAEVKRQGMPAVAMTDHGNMHGANDFYKQAMAAG
VTPVLGIEAYVAPESRFHKKRVRWGRPEQKSDDVSGSGGYTHMTIWARNRVGLHNLFKLT
SKAYTEGYFVKWPRMDAELLAEHADGLMATTGCPSGEVQTRLRLGHDAQALEAAAKYQDI
FGKENYFLELMDHGLDIEKQVRDGLLEIGRKLNIPPVVTNDSHYTHEAQSEAHDVLLCVQ
TGSNVADPNRFKFGGSGYYIKSADEMRGVDNSDVWLEGCRNTLLVAEKVDPTGMFEFHNL
MPRFPVPEGETEESWFRKETFAGLARRFPNGIPEGHVVQAEYELGVIIQMGFPSYFLVVA
DFIQWAKNQGIAVGPGRGSAAGSLVAYALGITDLDPIPHGLIFERFLNPERVSMPDVDID
FDERRRGEVIKYVTDKWGEDKVAQIATFGTIKAKAAIKDSARVLGYPYAVGDRITKAMPP
AVMGKDIPLEGIFDPKHPRYAEAGEIRGMYESEADVKKVIDTARGIEGLIRQTGVHAAGV
IMSAEPIIDHIPLMRRDSDGVIITQFDYPTCESLGLLKMDFLGLRNLTIIDDAVKNIQLN
HGKELDLLGLPLDDKGAYELLARGDTLGVFQLDGGPMRSLLRMMKPDNFEDISAVLALYR
PGPMGVDSHTNYALRKNGLQEITPIHPELEEPLKEILAPTYGLIVYQEQVQRAAQILAGY
TLGQADLLRRAMGKKKKEILDKEFIPFRDGCRERGYSDDAIQKVWDVLVPFAGYAFNKAH
SAAYGLVSYWTAYLKAHYPAEYMAALLTSVGDDKDKMALYLSECRRMGIQVLPPDVNTSA
GPFTPVGKEIRFGLGAIRNVGANVVTSIMRCRQEKGEYADFYDFLSKVDAVVCNKKTIES
LIKAGAFDSMGHSRKGLLTVHADAIDAYADVKRKEAVGQYDLFGAGFGEAEVATNTQVMP
TIGDGEWDKRDKLAFEREMLGLYVSDHPLFGLEHILGASADCTISALSEEGTVPDGAVVT
LAGILSGVQRRVTKQGRAWASATLEDLAGGVETLFFPNTYEVIGQYIAEDAIVVVKGRVD
RRDDIPRIMAMDMSLPDVSTSTTNKAVTLTIPVTRCTPPLVERLKETLVLHPGDAEVHVK
LLNGSRTTLLRLGPVRVAATTALMADLKSVLGPANVS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattcgttcgcgcatctgcacgtgcacacggagtactcgatgctcgacggggcg
gcccggctcaaggacctgttcgccgaggtcaagcggcagggaatgccggcggtcgcgatg
accgaccacggcaacatgcacggcgcgaacgacttctacaagcaggccatggctgccggg
gtgacgcccgtgctgggcatcgaggcgtacgtggcgccggagtcgcggttccacaagaag
cgggtgcggtggggtcgcccggagcagaagagcgacgacgtctccggtagcggtggttac
acccacatgaccatctgggcgcgcaaccgggtcggcctgcacaacctgttcaagctcacc
agcaaggcgtacaccgagggctacttcgtgaagtggccccggatggacgcggaactgctc
gccgagcacgccgacggactgatggccaccaccggctgcccctccggcgaggtgcagacc
cggttgcggctcggccacgacgcgcaggccctcgaagcggcggcgaagtaccaggacatc
ttcggcaaggagaactacttcctggagttgatggatcacggcctggacatcgagaagcag
gtccgggacgggctgctggagatcggccgcaagctgaacatcccgccggtggtcaccaac
gactcgcactacacccacgaggcccagtccgaggcgcacgacgtgctgctctgcgtgcag
accggcagcaacgtcgccgacccgaaccggttcaagttcggcggcagcggctactacatc
aagtcggccgacgagatgcgcggcgtggacaactccgacgtgtggctggagggctgccgc
aacacgctgctggtggccgagaaggtcgacccgaccgggatgttcgagttccacaacctg
atgccgcgtttcccggtgcccgagggggagaccgaggagtcctggttccgcaaggagacc
ttcgccgggttggcccgccgcttcccgaacggcatccccgaggggcacgtggtgcaggcc
gagtacgaactcggcgtcatcatccagatgggtttcccgtcgtacttcctcgtggtcgcc
gacttcatccagtgggccaagaaccagggcatcgccgtcggtccgggccgtggctcggca
gccggttcccttgtcgcgtacgccctgggcatcaccgacctggacccgatcccgcacggg
ctgatcttcgagcggttcctgaaccccgagcgcgtctccatgccggatgtcgacatcgac
ttcgacgagcgtcggcgcggtgaggtgatcaagtacgtcaccgacaagtggggtgaggac
aaggtcgcccagatcgccaccttcggcaccatcaaggccaaggccgcgatcaaggactcg
gcccgggtgctcggctacccgtacgcggtcggcgaccggatcaccaaggccatgccgccg
gcggtgatgggcaaggacatccccctcgaaggcatcttcgacccgaagcatccgcgctac
gccgaggccggcgagatccgcggcatgtacgagtcggaggccgacgtcaagaaggtcatc
gacaccgcgcggggcatcgaggggctgatccggcagaccggtgtgcacgccgccggcgtc
atcatgtccgccgagccgatcatcgaccacatcccgctgatgcgccgggactccgacggg
gtgatcatcacccagttcgactacccgacctgcgagtcgctcgggctgttgaagatggac
ttcctcggcctgcgcaacctgaccatcatcgacgacgcggtgaagaacatccagctcaac
cacggcaaggagctggacctgctgggtctgccgctggacgacaagggcgcgtacgaactg
ctggcccgaggcgacacccttggcgtgttccagctcgacggcgggccgatgcggtcgctg
ctgcggatgatgaagccggacaacttcgaggacatctccgccgtcctcgcgttgtaccgg
cccggcccgatgggcgtggactcgcacaccaactacgcgctgcgcaagaacggcctccag
gagatcaccccgatccacccggagctggaggagccgctcaaggagatcctcgccccgacc
tacggcctgatcgtctaccaggagcaggtgcagcgcgccgcgcagatcctcgccggctac
accctgggtcaggcggacctgctgcgccgggcgatgggcaagaagaagaaggagatcctg
gacaaggagttcattccgttccgggacggctgccgcgaacgcggctactccgacgacgcc
atccagaaggtctgggacgtgctggtcccgttcgccgggtacgccttcaacaaggcgcac
tccgccgcgtacggactggtgtcgtactggacggcgtacctgaaggcgcactacccggcc
gagtacatggcggcgctgctcacctccgtcggcgacgacaaggacaagatggcgctctac
ctgtcggagtgccgccggatgggcatccaggtgctgccgccggacgtgaacacctcggcc
ggtccgttcaccccggtcggcaaggagatccgcttcggcctcggcgcgatccgcaacgtc
ggcgcgaacgtggtcacctcgatcatgcgctgccggcaggagaagggcgagtacgcggac
ttctacgacttcctgtccaaggtggacgcggtggtctgcaacaagaagaccatcgaatcg
ctgatcaaggccggcgcgttcgactcgatggggcactcccgcaagggcctgctcaccgtg
cacgccgacgccatcgacgcgtacgccgacgtcaagcgcaaggaggccgtcggccagtac
gacctgttcggggcgggcttcggcgaagccgaggtcgccaccaacacccaggtcatgccg
acgatcggcgacggggagtgggacaagcgcgacaagctggccttcgagcgcgagatgctc
ggcctgtacgtctccgaccacccgctgttcggcctggagcacatcctcggcgcgtccgct
gactgcaccatctccgccctgtccgaggagggcaccgtgcccgacggtgcggtggtcacc
ctcgccgggatcctctccggcgtgcagcggcgggtcaccaagcagggccgggcgtgggcc
tcggccaccctggaggacctcgccggcggggtggagacgctgttcttcccgaacacctac
gaggtgatcggccagtacatcgccgaggacgcgatcgtggtggtcaagggccgggtggac
cggcgcgacgacattccccgcatcatggcgatggacatgtccctgcccgacgtctccacc
agcacgaccaacaaggcggtcaccctgaccatcccggtgacccggtgcactccgccgctg
gtggagcggctcaaggagacgctggtgctgcatccgggcgacgccgaggtgcacgtcaag
ctgctcaacggcagccgcaccaccctcctgcggctcggcccggtccgggtggcggcgacc
accgccctgatggccgacctcaagagcgtcctaggcccagccaacgtcagctga
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