Micromonospora maris: VAB18032_22695
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Entry
VAB18032_22695 CDS
T01471
Name
(GenBank) dsh domain protein
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
vma
Micromonospora maris
Brite
KEGG Orthology (KO) [BR:
vma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vma03019
]
VAB18032_22695
Enzymes [BR:
vma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
VAB18032_22695
Messenger RNA biogenesis [BR:
vma03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VAB18032_22695
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
wHTH-PRTase_assc
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEB45639
LinkDB
All DBs
Position
complement(4048977..4051754)
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AA seq
925 aa
AA seq
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MSSPAERYAAARRRAAQASQFPALEEFTSDIGFDLDDFQREACQALERGSGVLVCAPTGA
GKTVVGEFAVHLALRGTPGQPVPTDGARRKCFYTTPIKALSNQKYHDLVDRYGAAQVGLL
TGDNAINGDAPVVVMTTEVLRNMLYAGSATLEGLAYVVMDEVHYLADRFRGGVWEEVIIH
LPASVTLVSLSATVSNAEEFADWLITVRGETTVVVSEHRPVPLWQHMLVGKRMFDLFHDA
AAARKHDVHPELLRYTRETVRRLDLGEGRAAGWGGRRGPRWRGPSRPDIVERLDREGLLP
AILFIFSRAGCAAAVQQCLAAGLRLTSPEERAEIRRVVESRVTAIPGEDLSVLGYWEWLD
GLERGLASHHAGMLPVFKEVVEELFVRGLVKAVFATETLALGINMPARCVVLERLVKYNG
EAHVDLTPGEYTQLTGRAGRRGIDVEGHAVVVWSPETDPRHVAGLASTRTYPLRSSFRPS
YNMAVNLVGSVGADPARALLESSFAQFQADRSVVGLARQVQRNTETIEAYGVEAECHHGD
FDEYFALRVSIADRERALARQGQSQRRAAAVAALERLRVGDVIRVPSGRRAGLAVVLDPA
AGGFSEPRPLVLTQDRWAGRISPGDFTTPAEVLARIRVPKHFNPRNPAARRDLAAQVSGT
GLDRHSRRGARGRQSGEDHQLTQLRAELRRHPCHACPEREEHARWAERRRRLERDTEELR
ERVAGRTGSLARTFDRIVALLTTRGYLTAEGEVTDAGRMLGRIWTEADLLVAECLRRGVW
DGLSPAELAAAVSVVVFEARRDVDERASLPRGPVAEAVDATLKLWSEIEADEAARGLTVT
REPDLGFAWPIYRWARGEALAKVLASGHELDGEMPAGDFVRWARQVVDLLGQVADSGGAS
AELRATARQAIGVVNRGVLAYHAPA
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagccccgccgagcggtacgccgcggcgcgccgccgggccgcccaggcctcacag
ttcccggcgctggaagaattcacctctgacatcgggttcgatcttgacgatttccagcgt
gaggcgtgtcaggcgctggagcggggcagtggcgtgctggtgtgcgcgcccaccggcgcc
ggcaagaccgtggtcggcgagttcgccgtacacctggcgttgcgcggcacgcccgggcag
ccggtgccgaccgacggcgcgcgacgcaagtgtttctacaccacgccgatcaaggcgctg
tccaaccagaagtaccacgatctggtcgaccgctacggtgccgcgcaggtcggactgctc
accggcgacaacgccatcaacggcgacgccccggtggtggtgatgaccaccgaggtgctg
cgcaacatgctctacgccggctcggccaccctcgagggcctggcgtacgtggtgatggac
gaggtccactacctcgccgaccggttccggggcggggtgtgggaggaggtcatcatccac
ctgcccgcctcggtcaccctggtgtcgctgtcggcgaccgtgtccaacgcggaggagttc
gccgactggctgatcaccgtgcggggcgagaccacggtggtggtcagtgaacaccggccg
gtgccgctgtggcagcacatgctggtcggcaagcggatgttcgacctgttccacgacgcg
gcggcggcccgtaagcacgatgtgcacccggagttgctgcgctacacccgggagacggtc
cgccgtctcgacctgggcgaagggcgcgccgccggctggggtgggcgtcgcgggccgcgc
tggcgtgggccgtcgcggccggacatcgtcgagcggctggaccgcgaagggctgctgccg
gcgatcctgttcatcttcagccgggccggttgcgccgcggccgtgcagcagtgcctggcc
gccgggctgcgactcacctcgcccgaggaacgggccgagatccgtcgggtggtggagtcc
cgggtgaccgccatccccggcgaggacctgtcggtgctgggctactgggaatggctcgac
ggcctggagcgtgggctggccagccaccacgccgggatgctgccggtgttcaaggaggtc
gtcgaggagctgttcgtccgagggctggtcaaggcggtcttcgccaccgagaccctggcc
ctgggcatcaacatgccggcccgctgcgtggtgctggagcgcctggtcaagtacaacggc
gaggcgcacgtcgacctgacgccgggggagtacacccagctcaccgggcgggccgggcgg
cggggcatcgacgtggaagggcacgccgtcgtggtgtggtccccggaaaccgacccccgg
cacgtggcgggtctggcgtcgacccgcacgtacccgctgcggtccagcttccggccctcg
tacaacatggcggtcaacctcgtcggcagcgtcggcgccgacccggcccgcgcgttgctg
gagtcctcgttcgcccagttccaggcggaccggtcggtggtcggcctggcccggcaggtg
cagcgcaacaccgaaaccatcgaggcgtacggcgtggaggcggagtgccaccacggtgac
ttcgacgagtacttcgcgctgcgggtgtccatcgccgaccgggagcgggcgctcgcccgg
cagggccagagccagcgccgggcggcggcggtggccgcgttggagcggctgcgtgtcggt
gacgtgatccgggtgccgtcgggtcggcgcgccggcctggccgtggtgctcgacccggcc
gccggtgggttcagcgagccgcgtccgctggtgctgacccaggatcgctgggccgggcgg
atcagccccggcgatttcaccacgccggccgaggtgctggcccgcatccgggtgcccaag
cacttcaacccccgcaacccggcggcccgtcgtgacctggcggcgcaggtcagcggcacc
ggcctggaccggcacagccgtcgaggcgcccggggccggcagtcgggcgaggaccaccag
ctcacccagttgcgggccgagttgcggcgacacccctgtcacgcctgcccggagcgggag
gagcacgcccgttgggcggagcgtcgccgccggctggagcgtgacaccgaggagttgcgt
gagcgggtggccggtcggacgggatcgctggcgcgtaccttcgaccggatcgtcgccctg
ctcaccacccggggctatctcaccgccgagggcgaggtgaccgacgccgggcggatgctg
ggtcggatctggaccgaggccgacctgctggtggcggagtgcctacgtcggggggtctgg
gacgggctgtcgccggccgaactggccgccgcggtctcggtggtggtcttcgaggcccgg
cgtgacgtcgacgaacgggcgtccctgccgcgcggtccggtcgccgaggcggtcgacgcg
acgttgaagctgtggagcgagatcgaggccgacgaggccgcccgtggtctgaccgtcacc
cgcgagccggatctgggtttcgcctggccgatctaccggtgggcccggggtgaggcgctg
gccaaggtgctggccagtggacacgaactcgacggcgagatgccggccggtgacttcgtc
cgctgggctcgtcaggtggtggacctgctcggtcaggtcgccgactccggtggtgcctcg
gcggagcttcgggccaccgcccggcaggcgatcggtgtcgtcaaccggggtgtgctcgcc
taccacgcgccggcctga
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