Micromonospora maris: VAB18032_23180
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Entry
VAB18032_23180 CDS
T01471
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K03090
RNA polymerase sigma-B factor
Organism
vma
Micromonospora maris
Brite
KEGG Orthology (KO) [BR:
vma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vma03021
]
VAB18032_23180
Transcription machinery [BR:
vma03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VAB18032_23180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
Sigma70_ECF
MarR_2
HTH_Tnp_4
HTH_28
DUF7343
HTH_24
MarR
HTH_Crp_2
HTH_3
IF2_N
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AEB45736
LinkDB
All DBs
Position
complement(4152028..4152906)
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AA seq
292 aa
AA seq
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MFGQTTTTTPPSTDRGLEDLDAAALAYAARIAGMPPERRHEARDDLVRFALPFAGRLARR
YRGRGEPLEDLEQVARLGLVNAVDRYDPERGSFTAYAAITIVGEIKRHFRDRTWGVHVPR
RLRDLILEVGQATAALTSELSRAPTVAELSKRLDTPEEEILAALESAAGYSPASLNAPVG
GESSAEFGDLVGESDIALESVDDRVTVSGLLHRLPWRERRILAMRFYGNQTQAEIAARFG
ISQMHVSRLLSRALTWLRQAMLADAPPPWQNGVAESESTTANQTRPASARAR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgttcggacagaccaccacaaccacaccaccatccaccgatcggggtctggaggacctc
gacgcggcggcgttggcgtacgcggcacggatcgcgggaatgccaccggaacgccgccac
gaggcgcgggacgacctggtgcgtttcgccctgccgttcgccggccgcctggcgcgccgc
taccgggggcgcggcgagccgctggaggatctggaacaggtggcccggttgggtctggtc
aatgcggttgaccggtacgacccggaacggggctcgttcaccgcgtacgccgcgatcacc
atcgtgggcgagatcaaacggcatttccgggaccgcacctggggtgtgcacgtgccacgc
cggctgcgtgacctgatcctggaggtcggacaggcgaccgcggcgctgaccagcgagctg
tcccgggcaccgacggtcgccgagctgtcgaagcggctggacacgccggaagaggagatc
ctcgccgcgttggagtccgccgccggctacagcccggcgtcgctgaacgcgccggtgggc
ggggagagttccgccgagttcggtgacctggtgggggagtcggacatcgcgctggaatcg
gtcgacgaccgggtcacggtcagcgggctgttgcaccgtctgccctggcgggagcggcga
atcctggccatgcggttctacggcaaccagacccaggccgagatcgccgcccggttcggc
atctcccagatgcacgtgtcgcggttgctgtcgcgggcgttgacctggctgcgtcaggcg
atgctcgccgatgcgccgccaccgtggcagaacggggtcgccgagtccgagtcgacgacg
gcgaaccagacacgtcccgcctccgcgcgggcccgctga
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