KEGG   Micromonospora maris: VAB18032_24045
Entry
VAB18032_24045    CDS       T01471                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
vma  Micromonospora maris
Pathway
vma00040  Pentose and glucuronate interconversions
vma01100  Metabolic pathways
vma02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vma00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    VAB18032_24045
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VAB18032_24045
Enzymes [BR:vma01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     VAB18032_24045
SSDB
Motif
Pfam: Pectate_lyase_4
Other DBs
NCBI-ProteinID: AEB45907
LinkDB
Position
4340463..4341845
AA seq 460 aa
MRRIAAGAALITLTLTVAPASAAAHVPAGVAAVSSSTLSSSALSPLARQLGRQTLPAGDG
WASAGPGTTGGSTATADQVHVVTTRAELVAALGGDNATNATNSTPKIVYVKGTIDGFEGP
DGTLLDCTDLADPGYSLQAYLAAYDPAVWGRVAPSGPVEEARVRSVTNQTRHTQINVGAN
TTVIGLRGARLTGLTLMIDRVSNVIVRNITFDDARDCFPAWSPTDGEAGNWNSQYDQVSV
RRSENVWIEHNTFTDGDNPDSAQPVHFGRPYQVHDGALDITHTASLVTAAWNRFDGRDKL
MLIGSSNTVGPDVGRLNVTLHHNLFDGSLQRLPRVRFGQVDLYNNAYRLAGDDFEYAIGV
GVQSAVYAENNHFTLGTGITAADLLYDWGGTAITTRGNWVTPAGGLPRPVDLVAAYNAVH
DPDLSPDAGWTPTLRHGPVLPAPLVPLVVGPLAGADRLPL
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgcgcagaatcgccgccggcgcggcactgatcacactcaccctgaccgtcgcacccgct
tccgccgccgcccacgtaccggccggcgtcgccgcagtgtcctcgtcgaccctgtcctct
tcggccctgtctccgctggctcgccagctcggtcggcagaccctgccggccggtgacggc
tgggcgtccgccgggccgggcaccaccggcggctcgaccgcgaccgccgaccaggtgcac
gtggtcaccacccgggccgagctggtcgccgcgctcggtggcgacaacgccacgaacgcc
acaaacagcaccccaaagatcgtgtacgtcaagggcaccatcgacgggttcgagggcccc
gacggcacgctgctggactgcacggatctggccgatcccggttactcactacaggcgtac
ctggccgcgtacgacccggcggtctggggtcgggtggcgccgagcgggccggtcgaggaa
gcccgggtgcggtcggtgaccaaccagacccggcacacgcagatcaacgtcggcgcgaac
accacagtcatcgggcttcgcggggcgcggctgaccggcctcaccctgatgatcgaccgg
gtctcgaacgtgatcgtccgcaacatcaccttcgacgacgcccgggactgcttccccgcc
tggtcccccaccgacggcgaggccggcaactggaactcccagtacgaccaggtctcggtg
cgccgcagcgagaacgtctggatcgaacacaacaccttcaccgacggcgacaacccggac
agcgcccaaccggtccacttcggtcgcccgtaccaggtgcacgacggcgcgctggacatc
acgcacaccgccagcctggtcaccgccgcctggaaccggttcgacgggcgggacaagctg
atgctgatcggctcgtccaacaccgtcggcccggacgtcggccggctcaacgtcaccctg
caccacaacctgttcgacgggtcgctgcaacggctgccccgggtgcgcttcgggcaggtc
gacctctacaacaacgcctaccggctcgccggcgacgacttcgagtacgccatcggcgtg
ggcgtgcagtccgcggtgtacgcggagaacaaccacttcaccctcggcaccggcatcacc
gccgcagacctgctctacgactggggcggcaccgccatcaccacccggggcaactgggtc
acgccggcaggcgggctgccgcgtccggtcgacctggtggccgcgtacaacgccgtccac
gaccccgatctgagccccgacgccggctggacgcccacgctgcggcacgggccggtgctg
ccggcaccgctggtgccgctggtcgtcggtccgctcgccggtgccgaccgcctgccgctg
tag

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