KEGG   Micromonospora maris: VAB18032_24050
Entry
VAB18032_24050    CDS       T01471                                 
Name
(GenBank) secreted pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
vma  Micromonospora maris
Pathway
vma00040  Pentose and glucuronate interconversions
vma01100  Metabolic pathways
vma02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vma00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    VAB18032_24050
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VAB18032_24050
Enzymes [BR:vma01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     VAB18032_24050
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix F5_F8_type_C
Other DBs
NCBI-ProteinID: AEB45908
LinkDB
Position
4341948..4343516
AA seq 522 aa
MRRTVALRVLAALATTATGAAVCVAVMTPQASAAVGSATGFATRNGGTTGGAGGQTVRAT
TGTQIHAALCNRASSSTPITIQVEGTINHGNTTKVSGSSCNTAADVIELKQISNVTILGV
GNGATFDQIGIHIREASNIIIQNVTVRNVKKSGSPTSNGGDAIGMEANVRNVWVDHVTLE
ASGGESQGFDGLFDMKNNTQYVTLSYSILRNSGRGGLIGSSESDLSNGFVTFHHNLYENI
DSRAPLLRGGVAHIFNSHFSRINESGINSRAGAQAKVENNYFQNAKDVLGTFYTDQAGYW
QVSGNIFDNVTWSSRSGDTNPAGPNPTSNTSVSIPYSYRLDPANCVPDIVRQTAGANKGI
RTSNGSCTPTNPTSNPTTPTPGPTTPTPGPTSPTPTPSQPSGTNLSIGAGSDGSSKASGT
SYGDVRDGNMSTAWSPSGSTGQISIKWDTATRVSRVNIREASGAVGNVRSWRLLNHDTGA
VLATGSTAGVITFPATSLRKITFDITSSSGTPRIAEFETYAG
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgagacgcacagtcgcgctacgagtcctggcggcgctggccaccacggccaccggagcc
gccgtctgcgtggccgtcatgacgccacaggcgtcggcggccgtcggcagcgccaccggc
ttcgcgacccgcaacggcggcaccaccggcggtgccggcgggcagaccgtacgcgccacc
accggcacccagattcacgcggccctgtgcaaccgggccagcagcagcaccccgatcacc
atccaggtcgaggggaccatcaaccacggcaacaccacgaaggtgtcggggtcgagctgc
aacaccgccgccgacgtgatcgagctcaagcagatcagcaacgtcacgatcctcggtgtg
ggcaacggcgccaccttcgaccagatcggcatccacatccgcgaggccagcaacatcatc
atccagaacgtgaccgtccgaaacgtcaagaagtcgggctcccccacctccaacggcggc
gacgccatcggcatggaggccaacgtccgcaacgtctgggtcgaccacgtcaccctggag
gcctcgggcggcgagtcgcagggcttcgacgggctgttcgacatgaagaacaacacgcag
tacgtgacgctgtcctacagcatcctgcgcaactccggtcgcggtggcctgatcggctcc
agcgagagcgacctgtcgaacggtttcgtcaccttccaccacaacctgtacgagaacatc
gactcccgcgctcccctgctgcgcggcggtgtcgcgcacatcttcaacagccacttctcc
cggatcaacgagtccggcatcaactcccgggccggcgcccaggccaaggtggagaacaac
tacttccagaacgccaaggacgtgctgggcaccttctacaccgaccaggccggctactgg
caggtcagcggcaacatcttcgacaacgtgacctggtccagccgtagcggcgacaccaac
ccggccggtcccaacccgacctccaacaccagcgtcagcatcccgtactcgtaccgcctc
gacccggccaactgcgtgccggacatcgtccgccagacggccggcgccaacaagggcatc
cgtacgtcgaacggcagctgcacgccgacgaacccgacaagcaacccgaccacgcccacc
cccggcccgaccaccccgacgccgggcccgaccagcccgaccccgacgccgagccagccc
agcggcaccaacctgagcatcggggccggttccgacggctccagcaaggccagcggcacc
agctacggcgacgtccgcgatggcaacatgagcaccgcctggtcgccgtccggctcgacc
ggccagatctccatcaagtgggataccgccacccgggtctcccgggtcaacatccgcgag
gcctccggcgccgtcggcaacgtccggtcgtggcggctgctcaaccacgacaccggcgcg
gtcctggccaccggcagcacggccggcgtgatcaccttcccggccacctcgctgcggaag
atcaccttcgacatcaccagctcctccggcaccccccggatcgccgaattcgagacgtac
gccggttga

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