KEGG   Micromonospora maris: VAB18032_26230
Entry
VAB18032_26230    CDS       T01471                                 
Name
(GenBank) DNA polymerase i
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
vma  Micromonospora maris
Pathway
vma03030  DNA replication
vma03410  Base excision repair
vma03420  Nucleotide excision repair
vma03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VAB18032_26230
   03410 Base excision repair
    VAB18032_26230
   03420 Nucleotide excision repair
    VAB18032_26230
   03440 Homologous recombination
    VAB18032_26230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vma03032]
    VAB18032_26230
   03400 DNA repair and recombination proteins [BR:vma03400]
    VAB18032_26230
Enzymes [BR:vma01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VAB18032_26230
DNA replication proteins [BR:vma03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     VAB18032_26230
DNA repair and recombination proteins [BR:vma03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     VAB18032_26230
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     VAB18032_26230
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HHH_5 DNA_pol_lambd_f HHH
Other DBs
NCBI-ProteinID: AEB46344
LinkDB
Position
complement(4852796..4855495)
AA seq 899 aa
MTATTPRLLLVDGHSLAYRAFFALPVENFSTTTGQPTNAVYGFTSMLINVLRDEQPTHIV
VAFDVSRRSFRTEKYAEYKAGRSETPTDFKGQVSLVKEVLAALRIPVVEKEGYEADDIIA
TLACQARDQGMPVLISTGDRDAFQLVDEQITVLYPRKGVSDLARMDPAAVEAKYGVGPGR
YRDLAALVGETSDNLPGVPGVGPKTAAKWINTYGGVEGIIARADEIKGKAGDSLRERLAD
VIRNYEINCLVADLDLPIRPEDARWQGWDREAVHQVFDTLQFRILRDRLYQYLDAVEPEA
EAGFDLTGEVLTAPGALTGWLETHASPGTPVGVAVKLDTGPNRRHTATVTGLALATADGA
AAWFDPSRLDESDEAALAGWLADETRPKVLHDSKPAVLAFAAHGWTLAGIARDTQIAAYL
ARPDQRSYDLTDLALRYLHRELRVDVPDDGQLTLDGLGGDGEAEQNLMLHARATLDLADA
IDAELSRDGEQSARLMAGVELPLMRVLAGMERVGIAADTDYLSELEAHFAAEVKAAAQAA
YAVIGREFNLGSPKQLQEILFGELNLPKTKKIKTGYTTDADALQWLYAQTEHPLLHHLLR
HRDVARLKSTVDGLLKSVSDDGRIHTTFNQTVAATGRLSSTEPNLQNIPIRTEEGRRIRR
AFVVGEGYECLLTADYSQIEMRIMAHLSGDEALIEAFNSGHDFHAATASSVFEVAVAEVT
PDQRRKIKAMNYGLAYGLSAFGLSQQLGITAEEARGLMEVYFAGFGGVRDYLQEVVARAR
QDGYTSTILGRRRYLPDLVSDNRQRREMAERMALNAPIQGSAADIIKVAMLHVDTALRDA
GLRSRMLLQVHDELVFEVAPGERATLEELVRREMGGAYPLSVPLEVSVGEGRDWNSADH
NT seq 2700 nt   +upstreamnt  +downstreamnt
gtgacagctacgacgccgcgcctgctcctcgtcgacggacactccctggcataccgggca
ttcttcgccctgcctgtggaaaacttctccaccacgacggggcagccgaccaacgcggtc
tacggcttcacctcgatgctgatcaacgtgctgcgcgacgagcagcccacccacatcgtg
gtcgccttcgacgtgtcccgtcgctccttccgcaccgagaagtacgcggagtacaaggcc
ggccgcagcgagaccccgaccgacttcaagggccaggtcagcctggtcaaggaggttctc
gcggcgctgcggatcccggtggtggagaaggagggctacgaggccgacgacatcatcgcc
accctggcctgccaggcccgcgaccagggcatgccggtgctgatctccaccggcgaccgg
gacgccttccaactcgtcgacgagcagatcaccgtgctctacccccgcaagggcgtctcc
gacctggcccggatggatccggccgcggtcgaggcgaagtacggtgtcggccccggccgc
taccgggatctggccgcgcttgtcggcgagaccagcgacaacctgccgggcgtgcccggc
gtcggcccgaagaccgccgccaagtggatcaacacgtacggcggggtggagggcatcatc
gcccgcgccgacgagatcaagggcaaggccggcgacagcctgcgggaacgactcgccgac
gtgatccgcaactacgagatcaactgcctggtcgccgacctggacctgccgatccgcccc
gaggacgcccgctggcaggggtgggaccgggaggcggtgcaccaggtcttcgacaccctc
cagttccgcatcctgcgcgaccgcctctaccagtacctcgacgccgtcgagccggaggcc
gaggcgggcttcgacctgaccggtgaggtgctcaccgcgcccggtgcgctgaccggctgg
ctggagacgcacgcgtcgccgggcaccccggtcggggtggcggtcaagctggacaccggc
cccaaccggcggcacaccgccaccgtcaccggcctggccctggccaccgccgacggcgcg
gcggcctggttcgacccgagcaggctcgacgagagcgacgaggcggcgctggccggctgg
ctggccgacgagacccgccccaaggtgttgcacgacagcaagcccgccgtactcgccttc
gccgcgcacggctggacgctggccggcatcgcccgggacacccagatcgcggcctatctg
gcccgccccgaccaacgctcctacgacctgaccgacctggccctgcgttacctgcaccgg
gagctgcgagtcgacgttcccgacgacggccaactcaccctcgacgggctcggcggcgac
ggcgaggccgagcagaacctcatgctgcacgcccgggccaccctcgacctggccgacgcg
atagacgccgaactgtcccgtgacggggagcagtccgcgcggctgatggccggggtggag
ctgccgttgatgcgggtgctggccggcatggagcgcgtcggcatcgccgccgacaccgac
tacctgtccgagttggaggcgcacttcgccgccgaggtgaaggccgccgcccaggccgcg
tacgcggtgatcggtcgggaattcaacctgggctcgcccaaacagctccaggagatcctc
ttcggtgagctgaacctgcccaagaccaagaagatcaagacgggttacaccaccgacgcc
gacgcgttgcaatggctctacgcgcagaccgagcatcccctgctgcaccacctgctgcgc
caccgcgacgtggcccggctcaagtcgacggtggacggtctgctcaagtcggtctccgac
gacgggcgcatccacaccaccttcaaccagacggtggccgccaccggccggctctcctcc
accgagcccaacctgcagaacatccccatccgcaccgaggagggacggcgcatccgccgc
gccttcgtggtgggggagggttacgaatgcctgctcaccgccgactacagccagatcgag
atgcggatcatggcgcatctctccggtgacgaggcgctgatcgaggccttcaactccggg
cacgacttccacgcggccaccgcctcctcggtgttcgaggtggcggtcgccgaggtcacc
ccggaccagcggcgcaagatcaaagcaatgaactacggcctggcgtacgggctgagcgcc
ttcggcctgtcccaacagctcggcatcaccgccgaggaggcgcgcgggctgatggaggtc
tatttcgccgggttcggtggggtccgcgactaccttcaggaggtggtcgcccgagcccgt
caggacggctacacctccaccatcctgggccgccgccgctacctgcccgatctggtcagc
gacaaccggcagcgccgggagatggccgagcggatggccctcaacgccccgatccagggc
tcggcggccgatatcatcaaggtcgccatgctgcacgtcgacaccgccctgcgtgacgcc
gggctgcggtcccggatgctgctccaggtgcacgacgaactcgtcttcgaggtcgccccg
ggggagcgggcaaccctggaggagttggtccgccgcgagatgggcggggcgtacccgctc
tccgtacctttggaagtctccgtcggcgagggccgcgactggaacagcgccgaccactga

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