KEGG   Vidua macroura (Pin-tailed whydah): 128802761
Entry
128802761         CDS       T11570                                 
Symbol
RAB5B
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
vmc  Vidua macroura (Pin-tailed whydah)
Pathway
vmc04137  Mitophagy - animal
vmc04144  Endocytosis
vmc04145  Phagosome
vmc04148  Efferocytosis
vmc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:vmc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    128802761 (RAB5B)
   04145 Phagosome
    128802761 (RAB5B)
   04137 Mitophagy - animal
    128802761 (RAB5B)
   04148 Efferocytosis
    128802761 (RAB5B)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128802761 (RAB5B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vmc04131]
    128802761 (RAB5B)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vmc04147]
    128802761 (RAB5B)
   04031 GTP-binding proteins [BR:vmc04031]
    128802761 (RAB5B)
Membrane trafficking [BR:vmc04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    128802761 (RAB5B)
 Endosome - Lysosome transport
    128802761 (RAB5B)
Exosome [BR:vmc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128802761 (RAB5B)
  Exosomal proteins of other body fluids (saliva and urine)
   128802761 (RAB5B)
  Exosomal proteins of colorectal cancer cells
   128802761 (RAB5B)
  Exosomal proteins of melanoma cells
   128802761 (RAB5B)
GTP-binding proteins [BR:vmc04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    128802761 (RAB5B)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA AAA_16 SDR-like
Other DBs
NCBI-GeneID: 128802761
NCBI-ProteinID: XP_053825296
LinkDB
Position
Unknown
AA seq 215 aa
MAARGGPAAQRALAASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARARGWVKELQR
QASPSIVIALAGNKADLASKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
LPKTEPQSSSGAGGRGRGVDLSEQSPQGRGQCCSN
NT seq 648 nt   +upstreamnt  +downstreamnt
atggccgcccgcgggggcccagcggcccaacgggcactcgcagccagtaagatctgccag
ttcaaactggtgctgctgggagagtcggccgtgggcaagtccagcctggtgctgcgcttc
gtcaagggccagttccacgagtaccaggagagcaccatcggcgcggcgttcctgacgcag
tccgtgtgcctggacgacaccacggtgaagtttgagatctgggacacggcggggcaggag
cgctaccacagcctggcccccatgtactaccggggggcccaggctgccatcgtggtctac
gacatcaccaaccaggagacgtttgcccgtgcccggggctgggtgaaggagctgcagcgc
caggccagccccagcatcgtcatcgccctggccggcaacaaggctgacctggccagcaag
aggatggtggagtacgaggaggcccaggcctacgctgacgacaacagcctgctgttcatg
gagacctcggccaagacagccatgaacgtcaacgacctcttcctggccatcgccaagaag
ctgccaaagacggagccgcagagctcgagcggggccgggggccggggccggggcgtggac
ctgagcgagcagagcccgcagggccgcgggcagtgctgcagcaactga

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