Vidua macroura (Pin-tailed whydah): 128803272
Help
Entry
128803272 CDS
T11570
Symbol
DIS3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128803272 (DIS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vmc03019
]
128803272 (DIS3)
Messenger RNA biogenesis [BR:
vmc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
128803272 (DIS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Toxin_R_bind_C
Motif
Other DBs
NCBI-GeneID:
128803272
NCBI-ProteinID:
XP_053826044
LinkDB
All DBs
Position
2:50984424..51003856
Genome browser
AA seq
964 aa
AA seq
DB search
MLTSRTFVKRTRAGAVVKVVREHYLRDDIVCGAAACRLCPPAAPGNGSAPGLEARPSGPA
SSLCPGPHFLLPDTNLLLHQIDILEDPVIKNVIVLQTVLQEVRNRSAPVYKRIRDVIQNP
EKHFYSFTNEHHRETYIEQKRGETSNDRNDRAIRVAVKWYNEHLKKIEDEEKIQVIFLTN
DRINKEKALEEGITAYTCEEYIKSLTANPELVDRLACVSDEGKEIEGGKIIFPEHIPLSK
LQQGIKSGIYLQGTYRANRENYLEATVWVHGDAEENKEIIVQGLKHLNRAIHEDIVAVEL
LAKDEWVAPSSVVLQDDGQNEENIENEEEKENILKTSINKDMLRPTGRVVGIIKRNWRPY
CGMLSKSQIKEARRHLFTPADRRIPRIRIETRQADTLEGQRIIVAIDGWPRNSRYPNGHF
VKNLGSAGDKETETEVLLLEHDVPHQAFSQAVLSFLPKMPWSITEEDMKHREDLRHLSVC
SVDPPGCTDIDDALHCREIGNGTLEVGVHIADVSHFIRPGNALDEESVKRGTTVYLCEKR
IDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHKAEILKTRFTKSIINSKASLTYAEAQMR
IDSATMNDDITSSLRRLNKLAKILKKKRIDNGALTLASPEVRFHMDSETHDPIDLQTKEL
KETNSMVEEFMLLANISVAQKIYDEFPEFALLRKHPAPPPSNYDILVKAAKSKNLEIKTD
SAKALAESLDKAESPTFPYLNTLLRILTTRCMMQAVYFCSGMDNDFHHYGLASPIYTHFT
SPIRRYADIIVHRLLAVAIGADSTYPELTDKHKLAEMCKNLNYRHKMAQYAQRASVAFHT
QLFFKTKGVVNEDAYILFIRKNAIVVLIPKYGLEGTVFFEEKDKPTPKLEYNSEVPSLTV
ENTTLCVFDKVKVNIMLDDSNIQHQKMRMVLVEPKILGNDMHTSLSAEASSKEEPEKKKK
KRQK
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgctgacctcgcggacgttcgtgaagcgcacgcgggcgggcgcggtggtgaaggtggtg
cgcgagcattacctgcgcgacgacatcgtgtgcggcgccgccgcgtgccgcctctgcccc
cccgccgcgcccggcaacgggagcgcgcccgggctggaggcgcggcccagcggccccgcc
agcagcctctgccccgggccgcacttcctcctgcccgacaccaacctgctcctgcaccag
attgatatccttgaagatcctgttattaagaatgtcattgtgctacagacagtcctacaa
gaagtcaggaatcggagtgcaccagtgtacaagcgaattagggacgtgattcaaaaccca
gaaaaacatttctattctttcaccaatgagcaccacagagaaacgtacatagagcaaaag
cggggagaaacttctaatgaccgcaatgacagagccattcgggtagcagtgaaatggtac
aatgaacacttgaagaaaatagaggatgaggaaaagattcaagttatctttttaacaaat
gacagaattaataaagagaaagctctggaggaaggaataactgcctatacatgtgaggag
tatataaaaagcttgacagctaatcctgagcttgtagatcgtcttgcttgtgtatctgat
gaagggaaagaaatagaaggtgggaaaataatattcccagaacatattcctcttagcaaa
ttgcagcaaggaataaaatctggtatttacctccaaggaacttacagggcaaacagagag
aattatcttgaagctactgtttgggttcatggagatgctgaagaaaacaaagagataatt
gtacagggcctgaaacatttaaaccgagcaattcatgaagatattgtagccgtggagctg
ttggcaaaagatgaatgggtggcaccatcctcagtggtcttgcaagatgatggtcagaat
gaagagaacattgaaaatgaagaggagaaagagaacattctgaagacttccattaacaag
gacatgctgaggcctacaggaagagtagtaggcattataaaacgaaactggcggccgtat
tgtgggatgctttccaagtcacagatcaaagaggcaaggcgccatttgtttacaccagct
gatcgcagaattcctcgcattcgaatagaaaccagacaagcagatacattggaagggcaa
agaataattgttgctattgatggttggcccaggaattccaggtatcctaatggtcatttt
gtaaagaatttgggaagcgctggagataaagaaacagagacagaagttcttttgcttgaa
catgatgttcctcaccaggctttttctcaagctgtccttagtttcctaccaaaaatgcca
tggagcattacagaagaggatatgaaacacagggaggacttaaggcatctgagtgtttgt
agtgttgatcctcctggttgtacagatattgatgatgcattgcattgcagagaaatagga
aatggaactctagaggttggtgtacatattgcagatgtcagtcattttattcgcccagga
aatgctttggatgaggagtcagtaaaaagaggaacaacagtgtatctgtgtgaaaaaagg
attgatatggttccagagctacttagttccaacttatgctctctgagatctaatgtggac
aggcttgcattttcatgcatatgggaaatgaaccataaggctgaaattctaaaaaccaga
tttacaaagagtattattaattccaaggcttctcttacatatgctgaagcacagatgaga
atcgattcagcaactatgaatgatgatattactagcagcctacgtcgattaaacaaatta
gcaaaaattctgaagaagaaaagaattgataatggagccttgacacttgcgtcaccagaa
gttcgtttccacatggacagtgaaactcatgatcctattgatctgcagactaaggagctt
aaagagacaaattccatggttgaagagttcatgttgcttgccaatatttctgtagcacaa
aaaatttatgacgagttcccagagtttgccttgctccggaaacatcctgctcctccccca
tcaaattacgacatccttgtaaaggctgcaaagtccaagaatttggaaattaagacagat
tcagcaaaagctttagctgaatcattagacaaagctgaatctcctacattcccctaccta
aatacactgctgcgaattttgaccactcgctgcatgatgcaagctgtttatttctgctcg
ggaatggacaatgattttcatcattatggtttagcctcacctatttatactcactttact
tcacctattagaaggtatgctgatatcatagtccatcggcttttggcagtggccatagga
gcagacagtacttacccagaactgacagataaacacaaactggcagagatgtgtaaaaat
cttaattaccgacataaaatggcacaatatgcacaaagagcctctgtggcattccataca
cagctcttcttcaaaaccaagggagtagtaaatgaagatgcatatatattatttataaga
aaaaatgcaattgtggttctgattcccaagtatggcttagaaggaacagtcttctttgaa
gaaaaggataaaccaacaccaaaactggagtacaacagtgaggtgccatcacttactgtt
gaaaacacaacactatgtgtatttgataaagttaaagtgaacattatgttagacgactcc
aacatccaacatcagaaaatgcggatggtcttggtagagcccaagatattaggaaatgat
atgcatacaagtctctctgcagaggcaagcagcaaggaagaaccagagaaaaagaaaaag
aagcgacaaaaatag
DBGET
integrated database retrieval system
