Vidua macroura (Pin-tailed whydah): 128803287
Help
Entry
128803287 CDS
T11570
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
128803287 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vmc04131
]
128803287 (SPATA13)
Membrane trafficking [BR:
vmc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
128803287 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
Motif
Other DBs
NCBI-GeneID:
128803287
NCBI-ProteinID:
XP_053826080
LinkDB
All DBs
Position
2:complement(91316294..91487213)
Genome browser
AA seq
1335 aa
AA seq
DB search
MKAFSTPSLAAPPEELSSPSRCDGKADQGAADEGEAARSAGGDSSVALSYPSLHLHAYSI
ESMTTFPNGCGNGTTVTCIVMDDKETQNQTTCASHNGGHSTSSSLEEEFQEDKLSPSKIM
RFFTTPRKRANSSSDRPRSLVLMGNSSTWNAFSSIRKMGSFKKLKSSVQQGTQTRECSDI
VNENSIGKHGSNGAVVRVQTNRYSYSGPVHDFQNAVDGLASDCSDVEESDESFLRNTHRS
RSIRRAYGAGRINLLDTDKVQSRHNCVRPTSPVIAEPKICEILVKDSENNRIIYWRSKSS
DNLNFLKKSSFKRKSTSNLADLKVANEKQMPARTVSVASADSDKSGGNSERRSKRWKSPI
RAKDFDRVLKLVSNVTDVARKKDGPKNMAPSSSELSQRMRSNSRLHDDYSRRVSSSTDHD
RKRCASSVSSPDSSLPGTPCLQSPVIAQDKKAEMNVVVTEDKSLRTSSDIPDSDCFSPTL
DDISPFPNEVFYSDSDEPKATQQCTDEAENLHIPVRPTTPKPQSPTAGKVKCTMNFQYPN
HHSTLSLSSSESEERVELPGLKLGRNPVCFQDSVHTVYYDDGNEDSGISSHSQLSLNLAS
GTEEKKEEVVSDDHWKKSTSQDEEKADSQKVTPRKWGSGKRSRPRPLSDYGQMSIRSFSI
PEDAVAVESQEIDCTDGENQPGLASVGSVSQSNTVGYHRGRKRRPISVIGGVNFYGDDQV
EERENLLTQPVARPPVPAHKVPPYKAVSARFRPLTFSQSTPIGLDRVGRRRQMRTSNVAA
DGGTESSALVDDNGSEEDYSYEELCQAAPRYLQPGGEQLAINELISDGTVVYAEALWDHV
TMDDQELGFKAGDVIRVLEASNKDWWWGRNEDKEAWFPASFVRLRVNQEEVPENCSNIQD
EEQDSDSSKHRQKIAENRDQMRTNVIQEIMKTERVYIKHLKDICEGYIRQCRKHTGMFTT
AQLSTIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHP
SACIELSRLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQ
EHSDYSNIKAAYEAMKNVACLINERKRRLESIDKIARWQVSIVDWEGPDVLARSSELIHS
GELTKISKQGKSQQRTFFLFDHQLVFCKKDLLRRDILYYKDRIDMDETEIVDTEDGRDKD
FNINVKNAFKIINRATEEVHLFCAKKQEDKKRWMEACESERRRVQEDKEMGMEISENQKK
QAMQNARKSRQGKIKGVSYSGCPVPPPHQTLHPLHQRHITVPTSVPQQQVFALAEPKRKP
SLFWHTFNKLTPFKK
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccttcagtactcccagcttggcagcaccgcctgaggagctcagctcacccagt
agatgtgacggcaaggcagaccaaggtgcagcagatgaaggggaggcagcgaggtcagct
ggtggagacagcagtgttgctttgagctaccccagcctccacctccatgcctacagcatc
gagagcatgacaacatttccgaatggctgtggaaatggcaccaccgttacttgtatagtt
atggatgataaagagacccaaaaccagactacctgtgctagtcataatgggggacacagc
accagcagcagtcttgaggaggaatttcaagaggataagctcagcccttccaaaatcatg
cgctttttcaccacccctcggaaacgggctaattccagctctgacaggcctcgttctctg
gttctgatgggcaactcatccacgtggaatgccttttcttctatcagaaagatgggatct
ttcaagaagttgaaatcttcagttcagcaaggaactcaaacaagggaatgctcagacatc
gtaaatgagaacagcataggcaaacatggttcaaatggagcagtggtgcgagttcagact
aacaggtattcctattcgggacctgtacatgatttccagaatgcagtggatggtttagct
tctgactgctctgatgtggaggagagcgatgagtccttcctgaggaacactcatcgctca
cgcagcatcaggcgggcttacggtgctggccgcataaacttgttagacacagataaagtt
cagagtcgtcacaactgtgttaggccaacatcacctgtcattgcagagccaaagatctgt
gaaattttggtgaaagactccgaaaacaacaggatcatttattggagaagcaaaagttca
gataatttgaactttctgaagaaaagttcattcaaacggaagtccacctcaaaccttgct
gatctgaaggttgcaaatgaaaaacagatgccagcaaggactgtgagtgttgcttctgct
gactctgacaaaagtggtggaaactctgagaggcgatccaagcgatggaagagccctatc
agagcaaaggattttgaccgagttttgaaacttgtcagtaacgttacagatgttgctagg
aagaaggatggccccaagaatatggctccttcttccagtgagctgtcccagagaatgagg
tcaaacagcaggctgcacgatgactactcccgtagagtttccagcagcacggatcatgac
aggaagagatgtgcctcctcggtatccagtccagactcttccttgccaggaacaccttgc
ctgcaaagccctgtgattgctcaggataaaaaggctgaaatgaatgtagttgtcactgag
gataaaagcctcaggacatcatcagatatcccagactctgattgcttttcacctactctg
gatgacattagtccatttcccaatgaagtcttttattcggactcagatgaaccaaaagct
actcagcagtgtacagatgaagctgaaaaccttcacattccggtcaggccaactactcca
aagcctcaaagtccaactgcaggaaaggtcaagtgcactatgaatttccagtatccaaac
catcacagcacattgtcactgagctcatcagagagcgaggagagagttgagctaccaggg
ctgaagctgggcaggaatcctgtttgcttccaggactcagtgcatactgtgtattatgat
gatggaaatgaagacagtggcataagcagccactctcagctgagcctcaatttagcctct
ggtactgaagagaaaaaggaagaggttgtttctgatgaccactggaagaagtccacatcc
caggatgaagaaaaggcagactcacaaaaggtcacacccaggaaatggggctctggaaaa
agatcccggcccagacctctctcagactatggccaaatgtcgatccgaagtttctctata
ccagaagatgcagttgcagtggagtctcaggagatagactgcacagatggagaaaatcag
ccaggactggcatccgttgggtctgtgagccaaagcaatactgtaggctaccacagaggg
agaaaaagaagacccatctccgtaataggtggggtcaatttctatggagacgatcaagta
gaagagagagaaaatctgctgacacaacctgtggcacggccacctgttccagcacacaag
gtgcccccgtacaaggctgtttcagccaggttccggccactcaccttctcacaaagtacc
cccatcggtctggaccgggtgggacggaggcggcagatgagaacatctaatgttgctgca
gatggtgggactgaatcttcagctttagtggatgacaatggcagtgaggaagattacagc
tacgaggagctctgccaagctgctcccaggtacctgcagcccggaggggaacagctagca
attaatgagctgataagcgatggcaccgtcgtctatgcagaggctctctgggaccatgtc
actatggatgatcaagagctgggcttcaaagctggagatgtcattagagttctagaagct
tccaacaaagactggtggtggggaagaaatgaggacaaggaggcctggtttccagctagc
tttgtcaggctgcgagttaatcaggaagaagtgccagaaaattgtagtaatatccaggat
gaagaacaagattcagatagtagcaagcatcgccagaaaatagctgaaaacagggatcag
atgagaaccaacgttatacaggaaattatgaaaacagaacgagtctatatcaagcatctc
aaggacatctgtgagggttacattcggcagtgtcgcaaacatacaggaatgttcaccacg
gctcagttaagcaccatttttggtaatattgaagatatttacaagttccaaaggaagttt
ctgaaggatcttgagaaacagtacaacaaagaggaacctcatctaagtgaaatagggtca
tgttttcttcaacatcaagaaggctttgctatttattcggagtattgtaacaatcatccc
agtgcctgcattgagctctccagactgatgaagcagggcaaataccgccatttcttcgag
gcctgtcgcttgcttcagcagatgattgacattgccattgacggttttcttctcacgcct
gttcagaaaatctgcaaatatcctttgcagcttgcagaattgctcaaatacaccactcag
gagcacagtgattatagcaacataaaagctgcatatgaggccatgaagaacgtggcatgc
ctgatcaacgagcgaaaacggagactagaaagcatagacaagattgcccgttggcaagtc
tctatcgtagactgggagggaccagatgtgttagccagaagctcagaactgatccactca
ggagaactgaccaaaatatcaaaacaaggcaaaagccagcagaggactttcttccttttt
gaccatcagcttgtgttctgtaagaaggacttgctgagaagggatatcttgtactacaag
gatcgtattgacatggatgagacagaaattgtagacactgaagatggcagagacaaagat
tttaacatcaatgttaagaatgcttttaagataataaacagagcaacagaagaggttcat
ttgttctgtgcaaaaaaacaggaggataaaaagagatggatggaggcatgtgaaagtgaa
aggagaagagttcaagaagacaaggaaatgggtatggaaatctcagaaaaccagaagaag
caagccatgcagaatgcccgtaagtcaaggcaaggaaaaattaaaggtgtgagctatagt
gggtgtcctgtgcctcctccacatcaaacccttcatccccttcaccagcgacacatcact
gtgcctaccagcgtcccacagcagcaggtctttgccctggcagaacccaagcggaagcca
tcccttttctggcataccttcaacaaactcactccctttaaaaagtga
DBGET
integrated database retrieval system
