Vidua macroura (Pin-tailed whydah): 128803645
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Entry
128803645 CDS
T11570
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
vmc Vidua macroura (Pin-tailed whydah)
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vmc03000
]
128803645 (SOX1)
Transcription factors [BR:
vmc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128803645 (SOX1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128803645
NCBI-ProteinID:
XP_053826760
LinkDB
All DBs
Position
2:25468023..25469552
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AA seq
372 aa
AA seq
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MYSMMMETDLHSPGGAQAPTNLSGQTGAGGGGGGGGGGGNKANQDRVKRPMNAFMVWSRG
QRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRR
KTKTLLKKDKYSLAGGLLSAGSAGGGPAGVGVGMGVGVSPGSVGQRLESPGGTASGGYAH
MNGWANGAYPGSVAAAAAAAAMMQEAQLAYSQHPGSGGHPHHPHPHHPHHPHNPQPMHRY
DMGALQYSPISNSQGYMSASPSGYGALPYGSQPHQNSAAAAAAAAAAAAASSGALGALGS
LVKSEPSVSPPVTSHSRAPCPGDLREMISMYLPAGEGGDPAAAAAQSRLHSLPQHYQSAS
TGVNGTVPLTHI
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagacggacttgcactcccctggcggagcccaggcccccacg
aacctctcggggcagaccggagcgggaggcggcggaggcggcggcggcggcgggggaaac
aaagcgaaccaggaccgggtcaagagacccatgaacgccttcatggtgtggtcgcggggc
cagcggcggaagatggcccaagagaaccccaaaatgcacaactcggagatcagcaagcgc
ctgggggccgagtggaaagtcatgtcggaggccgagaagagaccgttcatcgacgaggcg
aagcggctgcgagcgctgcacatgaaggagcacccggattataaataccggccacggcgg
aagaccaagaccctgctcaagaaggacaagtactcgctggccggggggctgctgagcgcc
ggctcggccgggggaggcccggccggcgtcggcgtgggcatgggcgtcggcgtcagcccg
ggcagcgtcgggcagcggctggagagccccggcggcacggccagcggcggctacgcgcac
atgaacggctgggccaacggcgcctacccgggctcggtggcggcggcggcggcggcggcg
gcgatgatgcaggaggcgcagctcgcctacagccagcacccgggcagcggggggcacccg
caccacccgcacccacatcacccgcaccacccgcacaacccgcagcccatgcaccgctac
gacatgggtgccctgcagtacagccccatctccaactcgcagggctacatgagcgcctcg
ccctcgggctacggcgccctgccctacggctcccagccccaccagaactcggcagcggcg
gcggcggcagcggcggcggcggcggccgcctcctcgggtgcgctgggcgccctgggctcg
ctggtgaagtcggagcccagcgtgagcccgcccgtcacctctcactcgcgggccccgtgc
cccggggacctgcgggagatgatcagcatgtacttaccggccggggaaggcggggatccg
gcggccgctgccgcccagagccggctccactccctgccccagcactaccagagcgccagc
acgggggtgaacggcaccgtacccttgacgcacatttga
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