Vidua macroura (Pin-tailed whydah): 128803661
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Entry
128803661 CDS
T11570
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc03250
Viral life cycle - HIV-1
vmc03272
Virion - Hepatitis viruses
vmc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128803661 (PDCD6IP)
03272 Virion - Hepatitis viruses
128803661 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128803661 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vmc04131
]
128803661 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vmc04147
]
128803661 (PDCD6IP)
Membrane trafficking [BR:
vmc04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
128803661 (PDCD6IP)
Exosome [BR:
vmc04147
]
Exosomal proteins
Proteins found in most exosomes
128803661 (PDCD6IP)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
128803661
NCBI-ProteinID:
XP_053826799
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All DBs
Position
1:complement(49240387..49272434)
Genome browser
AA seq
878 aa
AA seq
DB search
MTNFISVQLKKASEVDLAKPLCKFIQQSYPGAEAQAEHCRAAEELSRLRKSALGRPLDKH
ESALETLLRYYDQLCSVEPKFPFSENQVCVTFTWKDAFDKGSLFGGSAKLALASLGYEKT
CVLFNCGALASQIAAEQNLDNDEGLKAAAKHYQFASGAFQHIKDTVLSALNREPTVDISP
DTVGTLSLIMLAQAQEVFFLKATRDKMKDGIIAKLANQAADYYGDAYKQCQYKDTLPKYF
YFQEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIGRLQHAADLVKTVASRYDEYIN
VKDLVDKINRALAAAKKDNDFIYHDRVPDLKDLESIGKASLVKSTPVVVPLSQKFTDLFE
KMVPLQVQQSVSVYNQRKADLVNRSIAQMREATNLANGVLASLNLPAAIEDVSGDTVPQS
ILNKSKSVIEQGGIQTVDQLIKDLPELLQRNKEILDESLRLLDEEEATDNDLRTKFKERW
QRTPSNELYKPLRAEGANYHNILNKAMQADGQVKERYQTHRDTIALLCKPEAELNAAIPS
ANPAKTLQGNEVVNVLRTLLASLDEVKKEREQLENDLKSVNFDMTSKFLTALAQDGAINE
EAISVTELDRIYGSYTQKVQESLKKQEELLKNIQNAHQDFSKMKQSNNESNLREEVLKNL
AVANDNFVELVANLKEGTKFYNELTEILLKFQNKCSDIIFARKTERDELLKDLQQSIARE
PSAPSIPLPTYQTTPAAGSKPAASPAPTPAPRTMVGTKPQPPARPPPPVISAASSSSSAL
APSGTAAAPAAAPAPTPGASAPAASTAPSQAQGPPYPTYPGYPGYCQMPMPMGYNPYMYG
QYNLPYAPSPVYQTPGQPPYPPPQQPGYPFPQQPYYQQ
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacttcatctcagtgcagctgaaaaaggcttcggaggtggacctggccaagccg
ctgtgcaagttcattcagcagagctacccgggcgccgaggcgcaggccgagcactgccgc
gccgccgaggagctcagcaggctccgcaagagcgcgctcggccgcccgctcgacaagcac
gagagcgcgctggagacccttctcagatactatgatcagctgtgttcagttgaaccaaag
tttccattctctgaaaatcaggtctgtgtaacatttacgtggaaagatgcttttgataaa
ggatcactttttggaggatctgccaagttggctctggcaagtttgggatatgagaagacc
tgtgttttgttcaactgtggagcattggcaagccagattgcagcagaacagaatctggat
aacgatgaaggactaaaagctgcagctaagcactatcagtttgctagtggtgcttttcaa
cacattaaagacacagttttgtcagccttgaatcgagaacctacagtggacatctctcca
gacacagttgggactctcagtcttattatgctggctcaagcccaggaagtcttttttttg
aaagcaacaagagataaaatgaaagacggtatcatagctaaactagcaaatcaagctgca
gattactatggtgatgcttacaaacagtgtcaatataaagatactttgcccaagtatttt
tatttccaggaggtgtttcctgttctggctgcaaagcactgcattatgcaggccaatgca
gaatatcatcaatctatcctggcaaaacaacagaagaaatttggtgaagaaattgggagg
ttacagcatgcagcagatttggtgaaaacggtggcatctcgctatgatgaatatataaac
gttaaagatctggttgacaaaatcaaccgtgcacttgcagctgccaaaaaagacaacgac
ttcatttaccatgaccgggtccctgacctgaaagatttggagtccattggaaaagccagt
cttgtgaagtctactccagttgttgttccactcagtcagaaattcactgacctgtttgag
aagatggttccattgcaagtgcaacaatctgtgagtgtttataaccagaggaaggcagat
ctggtaaacaggtcaatagcccagatgagagaagccacaaatctggcaaatggtgtgttg
gcttcccttaatcttcctgctgctattgaagacgtgtctggtgataccgttcctcagtct
attttgaacaagtctaagtctgtgattgagcaggggggaattcagactgttgatcagctg
atcaaagatctgcccgaactgctgcaaaggaacaaagaaattctagatgaatctctgaga
ttattagatgaagaagaagctacagacaatgacctgcgaacaaaattcaaagaacgctgg
cagagaacaccgtccaatgaactctataagcctctgagagcagagggagccaattaccat
aatattttgaataaagctatgcaagcagatgggcaggtgaaggagcgctatcagactcac
cgggatacaattgcacttctgtgtaagccagaggcagaactcaacgcagccataccttct
gccaacccagcaaaaacactacagggaaatgaggttgttaatgtcttaagaactttgctg
gccagtctggatgaagttaagaaggagagagaacaactggaaaatgacctaaaatctgtg
aattttgacatgacaagcaaattcctgactgcacttgcacaggatggtgctataaatgag
gaggctatctctgtgactgagttggacagaatttatggaagttacacacagaaagtgcag
gagtccttaaaaaagcaggaagaacttctcaaaaacattcagaacgcgcatcaggatttt
tcaaagatgaaacaatcaaacaacgaatctaatttaagagaagaagtcttgaagaactta
gctgtagcaaatgacaactttgtggaacttgtagccaatttaaaagaaggcacaaagttt
tacaatgagctgacagaaatcctgctgaaattccagaacaagtgcagtgacattatcttt
gctcgcaagactgaaagagatgaactgctcaaagatttgcagcaaagcattgctagggag
cccagcgctccctccattccgctgcctacgtatcagaccacgccagcagcaggaagtaag
ccagcagcatcgcccgctcccactccagccccgagaaccatggtggggactaaaccacag
ccaccagcaaggccaccaccaccagtgatttctgcagcaagcagttcctcttctgcatta
gcgccctctggaacagctgcagctcctgctgctgctccagctcctactccaggagccagt
gcacctgcagcaagcactgcaccttcacaggcacagggaccaccttacccaacttatccc
ggttacccagggtattgccagatgccaatgccaatgggctataatccatacatgtatggt
cagtataatctgccatatgcaccctcacctgtgtatcaaactcctgggcagccaccatat
ccaccacctcaacagcctggatacccttttcctcaacagccttattatcagcaataa
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