Vidua macroura (Pin-tailed whydah): 128803803
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Entry
128803803 CDS
T11570
Symbol
TBC1D4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
vmc
Vidua macroura (Pin-tailed whydah)
Pathway
vmc04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
128803803 (TBC1D4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vmc04131
]
128803803 (TBC1D4)
Membrane trafficking [BR:
vmc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128803803 (TBC1D4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
128803803 (TBC1D4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
128803803 (TBC1D4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
TBC1D_hel
DUF3350
PID
Laminin_I
DUF6047
DUF4249
Motif
Other DBs
NCBI-GeneID:
128803803
NCBI-ProteinID:
XP_053827039
LinkDB
All DBs
Position
2:49990055..50088306
Genome browser
AA seq
1228 aa
AA seq
DB search
MEKRGEGEPLSHPLEPEPEPQPAPPGEKRFRLWYVGSSCLDRRTTLPMLPWLVAEIRRRG
QRQEPGGAPGSGVPAREVLLLLGSPTLRCVPASPGRPASPAPAVFIFEHKAQHIARFIHN
SHDLTYFAYLIKAQPDNPDSPMACHVFRATDPNQVPDVISSIRQVSKAALKEDAKPSKDS
EDAFYDSQKFEVLYCGKVTVAHKKAPSTLIDDCIEKFSLHERQRLKLLNEQQNNESSLDL
PLCEENVPASPLDSPFEELDSPNSTSGRAAMFTIGSQTNLTNLASTRGFFPEKILEDSGF
DEQQEFRSRCSSVTAVMQRRVHDTNLKIQSRRRHASAPSHVQPSDSEKNRTMLFQVGRFE
VNLISPDTKSVVFEKNFKDISSCSQGIKHVDHFGFICRESVEPGLSQYVCYVFQCASESL
VDEVMLTLKQAFSTAAALQNAKTQIKLCEACPMHSLHKLCERIEGLYPPRAKLVIQRHLS
SLTDNEQADIFERVQKMKPDNDQEENELVIFHLRQLCETKQKTHIHIGEAPSVISNSAIP
ESTTSGGRFKLDILKNKAKKSLTSSLENIFSRGANRMRGRLGSVDSFERCSSLASDRDTS
PGDSPPATPPASPVSSAWQTFPEEGTDSPQFRRRAHTFSHPPSSARRRITFQNGRSQSAR
SPLLRQNGVEAASDGEGKKRTSTFCSSESLNAAGATLTPRRISWRRRIFLQVASPMNKSP
SKMQHPDGHDGSELLPLSPLAAPLEEDPVVLVLQNEDGPDKTGERKNSEELQSLWRKAIH
QQILLLRMEKENQKLEASRDELQSRKVKLDYDEVGTCQKDAINIWDKKLLNCRAKIRCDM
EDIHSTLKEGVPKSRRGEIWQFLAVQHRVRHRLPNKQQPPDISYKELLKQLTAQQHAILV
DLGRTFPTHPYFSTHLGAGQLSLFNLLKAYSLLDKEVGYCQGISFVAGVLLLHMSEEQAF
EMLKFLMYDLGFRKQYRPDMMSLQIQMYQLSRLLHDYHRDLYNHLEENEISPSLYAAPWF
LTLFASQFSLGFVARVFDIIFLQGTEVIFKVALSLLSSQETSIMGCESFENIVDFLKTTI
PDMTKPQMEKIITQVFEMDISKQLHAYEVEYHVLQDELQENVSPCDEGEPLEKLERSNNH
LKRQNMDLLEKLQVAHAKIQSLEASLETVLTRENKMKTVIQSLEQEKIIYQKTLEQIVKY
LPAEVLSDCELLLKEVNYNPNNKIWSKP
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcgaggggagggcgagccgctctcccaccccctggagcccgaacccgagccg
cagccggcgccgccgggggagaagcgcttcaggctgtggtacgtgggttcgtcgtgcctg
gataggcggaccacgctgcccatgctgccctggctggtggccgagatccgccgccgcggc
cagcggcaggagcccggcggcgccccgggcagcggggtgccggcccgcgaggtgctgctg
ctgctgggctcgcccacgctgcgctgcgtgcccgccagccccggccgccccgccagcccc
gcgcccgccgtcttcatcttcgagcacaaggcgcagcatatcgcccgcttcatccacaac
agccacgacctcacctacttcgcctacctgatcaaggcgcagcccgacaaccctgactcc
cccatggcctgccacgtcttccgggccaccgaccccaaccaggttcctgatgtcatcagc
agcataagacaagtctctaaagcagcactgaaagaagatgccaaaccaagtaaggatagt
gaagatgccttctatgactctcaaaaatttgaggtcttgtactgtggaaaggtgacagtg
gctcacaagaaagctccctccacactaattgatgattgcatagaaaaattcagccttcat
gagcgccagcgcctgaaactgttaaatgagcagcagaataatgagtcgagcttggacttg
cccctgtgtgaagaaaatgtgccagcttctcctctggacagcccttttgaggagctggac
agcccaaacagcacctcagggcgtgctgcaatgtttacaattggcagccagactaacttg
accaacctggccagcactcgtggcttctttccagagaagattttagaggactctggcttt
gatgagcagcaggagtttcgctcccggtgcagcagtgtcactgcagtgatgcagagaagg
gttcacgacacaaacctgaaaatacagtcccgcagaagacacgcaagtgctcccagtcac
gttcaaccctctgattctgagaagaacaggacaatgttgttccaggttggaaggtttgaa
gttaacctcatcagtccagataccaaatctgttgtgtttgaaaagaattttaaagatatc
tcctcatgttctcagggtataaaacatgttgatcactttggttttatttgccgagaatct
gtggaacctgggttaagccagtatgtttgctacgtgttccagtgtgcaagtgagtctctg
gttgatgaggtaatgctgaccctgaagcaagccttcagcactgctgcagccctgcaaaat
gccaagacgcagatcaaactgtgtgaggcctgccctatgcattcattgcacaaactttgc
gaaagaattgaaggactctatccaccaagagccaaacttgtaattcagagacatctgtca
tcgctaactgacaatgagcaagcagacatttttgaacgtgttcagaaaatgaagcctgac
aatgaccaggaagaaaatgaacttgtgatctttcatctccgtcagctctgtgagactaag
cagaaaacgcacatccacattggtgaagcaccgtcggtcatttctaacagtgcgattcca
gaaagcaccaccagtggtggccggtttaaacttgacattctgaaaaacaaggcaaagaaa
tccttgactagctctctggaaaatatcttctcaaggggagccaacagaatgcgaggccgc
ctgggaagcgtggacagctttgagcgctgcagcagcctggcttctgacagagacacttct
ccgggcgattccccaccagctactcctccagcatcccccgtgtcctcggcctggcagacg
tttcccgaggaaggcacggactccccccagttcaggaggcgcgcgcacaccttcagccac
ccgcccagcagtgccagacggaggataaccttccagaacgggaggtcccagagcgcccgg
tccccgctgctgcggcagaacggcgtggaggcagcaagtgatggggagggaaagaaaaga
acatcaaccttctgcagcagtgaatctctaaatgctgcgggggccacgctcacacctcgc
cgcatctcctggcggcggagaatattcctgcaggtagcttcacctatgaataaatctcct
tccaagatgcagcatccagatggtcatgatggaagtgaattgttacccttatcccctctt
gctgcacccctggaggaagaccctgttgttctagtattgcaaaatgaggatggtccagat
aaaactggagagaggaaaaactcagaagaactacaaagtctgtggagaaaagccatccat
caacaaattctgttacttcgaatggaaaaagaaaaccagaagctggaagcaagcagagat
gagctccaatcaagaaaagtaaaactggactatgatgaagttggcacatgtcagaaagat
gctataaatatttgggataagaagttactaaactgcagagccaaaatccgatgtgacatg
gaagatattcattccactttaaaagaaggtgtaccaaaaagtcgtcggggagaaatttgg
cagtttttggctgtgcaacaccgagtcaggcacaggctgccaaacaagcagcagcctccc
gacatctcttacaaagaacttctgaaacaactgactgctcaacagcatgccatccttgta
gatctaggacggacattccctacacatccttacttttccacacacctgggagcaggacag
ctatcactgtttaatctcttgaaagcgtattctttgctggacaaagaagttggttattgt
caaggtataagttttgtagctggagtgctgcttctacatatgagtgaagagcaggccttt
gaaatgctgaaattcctcatgtatgaccttggcttccgtaaacagtacagaccagacatg
atgtcgctacagattcagatgtatcagctctcaaggcttctacatgattatcacagagac
ctgtataatcatcttgaagagaatgaaatcagtcccagtctttatgctgcaccgtggttt
cttacactgttcgcatctcagttttcattaggatttgtagccagagtgtttgacattatt
tttcttcaaggaacagaagtaatatttaaagtagcactgagcctacttagcagtcaagag
acatctataatgggatgtgagagttttgagaacattgttgactttcttaaaaccactatt
ccagatatgactaaacctcaaatggaaaaaattattactcaggtatttgagatggatatt
tcaaaacagctccatgcctatgaagtagagtaccatgttcttcaggatgaactacaggaa
aatgtgagtccctgtgatgaaggtgaacctctggagaagctggagaggtcaaacaatcat
ttgaagaggcaaaatatggatttgttggagaagctacaggttgctcatgctaaaattcag
agtctggaagccagcctggagactgttttgacacgagagaacaaaatgaagactgtaatt
cagtccctggaacaggagaagataatatatcaaaagactcttgagcagatagtgaagtat
ttgccagcagaagtgttgtctgactgtgaactgctcctgaaggaagtaaattacaaccca
aataataaaatatggagtaagccataa
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integrated database retrieval system
