Vidua macroura (Pin-tailed whydah): 128804014
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Entry
128804014 CDS
T11570
Symbol
NUP58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128804014 (NUP58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vmc03019
]
128804014 (NUP58)
Messenger RNA biogenesis [BR:
vmc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128804014 (NUP58)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
NUP58_M
FapA
Tox-ODYAM1
NET2A_C
Nup49_C
Mitofilin
PSY3
XAC0095_dom
ASNSD1-SEP
Motif
Other DBs
NCBI-GeneID:
128804014
NCBI-ProteinID:
XP_053827390
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All DBs
Position
2:91602891..91642388
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AA seq
600 aa
AA seq
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MSTGFSFGAGTLGSTAAAGAGGGGAVGGFSFGTATPSSTGGLNFGTLGSSTATATTSAPS
SGFGSGLFGTKSTTGFTLGSTSTAGAATTIATGLTLGTPATTSAATTGFSIGFNKPAGSA
TPFALPVTSTSAGGLSLSSALTSTPAAGTTGFTLNLGGTTAPTTTASTGLSLGGALAGLG
GSLFQNTSTAATGLGQNALGLSLGTTAAPSTTANEGLGGIDFSSSSDKKSDKTGTRPEDS
KALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSVVAS
GLQRNILNIDKLKVETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVEQFEVQLQQ
YRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKMLKDQYLG
YRKSFLGDAMDVFEARRTEAKKWQSAPRVTTGPTPFSNIPNAAAVAMAATLTQQQQPATG
PQPSLGVSFGTPFGSGIGTGLQSSGLGSSSLGGFGSSSAFGSSATGASSFGFGTTSKPSG
SLSAGFGSSTTSGFNFSNPGITASAGLTFGVSNPASAGFGTGGQLLQLKKPPAGNKRGKR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgggcttctccttcggcgcgggcaccctgggctccacggcggccgccggggca
ggaggaggaggagcagtcgggggattttccttcggaaccgccacgccgagctcaacagga
ggacttaattttggaactctgggctcctccactgctacagcaactacatcggctccttca
tcaggttttgggagtggactttttggaacaaaatcaaccactggctttacactaggaagc
accagtacagcaggagcagcaacaactattgctacaggactgacattaggcacacctgcc
accacatcagcagctaccacaggctttagtataggtttcaacaaacctgcaggttcagcc
acaccatttgctttacctgttacttctacctcagcgggtggtctgtcattatcatctgct
cttacatcaactcctgcagcaggaactactggctttacattaaatttgggtggcacaact
gctccaactacaactgcttccacaggcctttccttaggaggagccttagcaggcttagga
ggttcgcttttccagaatacaagcacagcagcaacaggacttgggcagaatgctttgggt
ttgtctctggggacaactgcggctccttcaaccactgccaatgaaggtcttggtggcatt
gattttagcagttcttcagacaaaaagagtgacaaaacgggaacaagaccagaagatagc
aaagcactgaaggatgaaaatctacctccagtaatatgtcaagatgtagaaaatctacag
aaatttgtgaaagaacaaaaacaagttcaggaagaaattagtagaatgtcctctaaagcg
atgcttaaagtacaagaagacattaaagctttgaaacagcttctctctgtagttgccagt
ggattacagagaaacattcttaatattgacaagctgaaagtggaaactgcccaggagcta
aagaatgcagaaatagcattgcgaacacagaaaactcctcctggtcttcagcatgaaaat
acagccccagcagactacttcagaatcttggtcgaacagtttgaagtacagctgcagcag
tacaggcaacaaattgaagaactggaaaatcatcttgccactcaagcaaataattcacac
ataactccacaagatttgtctatggctatgcagaaaatctatcaaacatttgtagcttta
gctgcacaacttcagtcaatacatgaaaatgtaaagatgctcaaagaccaataccttggc
tacaggaaaagctttctgggagatgccatggatgtgtttgaggcaagacgaacagaagct
aagaagtggcaaagcgcgccacgcgttaccactggaccgacccctttcagcaacatacca
aatgcagcagccgttgcaatggctgcaacacttactcagcagcagcagcctgctacaggg
ccacagccatctctgggagttagttttggaacgccattcggctcaggtattggcactggc
ttgcaatcaagtggcttaggttcttcaagccttggaggatttggaagtagctctgccttt
ggaagtagtgccacaggagcgtcatcatttgggtttggaactacaagtaaaccatcagga
agtctaagtgcaggctttgggagctcgactacatctgggtttaacttcagcaatcctggc
atcacagcatcagctggcctgacgttcggggtgtctaatcctgcatctgcaggctttggg
acaggagggcaacttcttcagctgaagaaacctccagctggaaacaagcgagggaaaaga
tag
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