Vidua macroura (Pin-tailed whydah): 128804089
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Entry
128804089 CDS
T11570
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43 isoform X1
KO
K12586
exosome complex component RRP43
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128804089 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vmc03019
]
128804089 (EXOSC8)
Messenger RNA biogenesis [BR:
vmc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128804089 (EXOSC8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Modigliani
Motif
Other DBs
NCBI-GeneID:
128804089
NCBI-ProteinID:
XP_053827529
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All DBs
Position
2:96403199..96412741
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AA seq
294 aa
AA seq
DB search
MAAAAAGPPAEAAGRAGRQGAPHPGRRRHRHGGSVQKENCRPDGRELGEFRTTTVNIGSI
TTADGSALVKLGNTTVICGVKAELAAPAVDSANKGYIVPNVELPSLCAERFRSGPPGEEA
QAASQFIADVIENSQMIVKEDLCIANGKLAWVLYCDIICLDYDGNLLDASVFALLAALKN
VQLPLVTINEETGLSEVNLKQKNPLFIRKHPVATSFAIFDDTLLIVDPTAEEEDLATGTV
TIVTDEEGRLCSVHKPGGSPLTGAKLQDCITRAITRHKEVKKLIDKVIKSITPK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgctgccgccggtccgcccgcggaggctgccgggagagcgggccgccagggg
gcgccacatccggggcggagacggcaccgccatggcggcagcgttcaaaaggagaactgt
cggcctgatggaagagagttaggtgaatttcggacaaccactgtcaacataggttcaatt
acaactgcagatggttctgccctggtgaagctaggaaataccacagtgatttgcggagta
aaagcggaacttgctgcacctgcagtggattctgctaataagggatatattgttccaaat
gtggagctgccatccctctgtgcagagaggtttcgctctggaccacctggggaagaggct
caagcagcgagccagttcattgcagatgtgattgaaaattcacagatgatagtgaaagaa
gatctgtgcattgccaatggcaagcttgcatgggtgttatactgtgatatcatatgtctg
gactatgatggaaaccttctggatgccagtgtctttgctttgttggcagcattaaaaaat
gtgcaattgccgttggttacgataaacgaagaaactggtttatcagaagttaatttaaaa
cagaagaatcctttgtttatcagaaagcatccggttgccacatcatttgctatatttgat
gacacgctactcattgttgatccaactgctgaagaagaagatttagcaactggaacagta
accattgtaactgatgaagaaggcagactctgttctgtccataaaccaggtggaagtcct
cttacaggagccaagcttcaggactgtatcaccagagcaattacaagacacaaagaagta
aagaagctgatagacaaagtaataaaaagtataacacccaagtga
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