Vidua macroura (Pin-tailed whydah): 128804222
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Entry
128804222 CDS
T11570
Symbol
LCMT2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4 isoform X1
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
vmc Vidua macroura (Pin-tailed whydah)
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vmc03016
]
128804222 (LCMT2)
Enzymes [BR:
vmc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
128804222 (LCMT2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
128804222 (LCMT2)
Transfer RNA biogenesis [BR:
vmc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
128804222 (LCMT2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Beta-prop_FBX42
Beta-prop_TYW4
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
Kelch_HCF
Glyoxal_oxid_N
Motif
Other DBs
NCBI-GeneID:
128804222
NCBI-ProteinID:
XP_053827787
LinkDB
All DBs
Position
2:complement(118868..142505)
Genome browser
AA seq
681 aa
AA seq
DB search
MLVRSGSAVSLSRQVQDTGGSSAVSKCSAAARGYIQDRFLRLLAGRRRRRAPLIHRGYYI
RARAVDHCVQDFLLKTQSLARTQILSLGAGFDSLYFRLKDMGLLHHTVVYEVDFPNVACQ
KATLIKGIKELSALVGDTGGEGLGAITFSGDDYKLLGVDLSELSELERTLEEAGLNNEIP
TLFIAEVVLTYMENTRSDALIQWAAEHFPRACFLLYEQVHPEDPFGRVMQQHFRQLNTAL
HSLAQYPDCKAQQRRFLGKGWTECSVMDMNEFFTCCIPEDEQQRVQTLEPFDEYEEWHLK
CSHYFVLAASKGMEPSWTPLSPSVAVPGPVGMAGSVSAAVCARLSGIPGLRRYGHHSVLI
KPNVILTMGGFGEEDGQHCRVRNFHVLSKHAGHWEAVCVAQNIPDKRWGERLYHTVSCLS
DTLALVVGGRTSPSSTGLGMLWLKFPKTCDASGPDDVAVELVSLQPAAEAAALRWRHSTT
EITFKGEQYLFVYGGRSALEPVLGDWHFLHAPELSYTAIAVEGPVPESRHSHSACSWEGG
VLIAGGLGAAEQPLGSVFLLRELEHGFQWQTIETHPPLVPRYSHTAHVHEGKLLLVGGVW
FHAPSVPGVTVIDLMTGLCLNYRINVEHLEWPLMLHNHSSVFLPNEKELLVIGGGGNCFS
FGTHLNPEPVLLSLSSILTSH
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcaggagcggcagcgccgtgtcattgtcccggcaggtccaggacaccggcggc
agcagcgccgtcagcaagtgctcggcggcagcgcggggctacatccaggaccggttcctg
cggcttctggcggggcggcggcggcggcgagcgccccttatccaccggggttattacatc
cgcgcccgtgctgtagatcactgtgttcaggacttcctgctgaagacacaaagcctagcc
aggacacagatcctatctttaggtgctggctttgattccttatacttccgtttgaaggat
atgggtcttctgcatcacactgtggtatatgaggtagatttcccaaatgtggcatgccaa
aaagctactctgatcaaaggaattaaagagttgtcagcgctggtgggagacactggaggg
gaaggattaggagccattaccttttctggagatgattataaattactgggagtggattta
tcagagctgtctgagctggagagaaccctggaggaagcaggactgaacaatgaaattccc
accctcttcatcgcagaggtggtgctcacctacatggagaacaccaggtcagatgccttg
attcagtgggcagcagagcatttccctcgggcgtgcttcctgctgtatgagcaggtgcac
ccagaggacccctttggacgtgtcatgcagcagcatttcaggcagctgaacactgcactg
cactcactggcacagtaccctgactgcaaggctcagcagaggcgcttcctggggaagggc
tggactgagtgcagtgtcatggatatgaatgagtttttcacctgttgtattccagaagat
gagcagcaaagagtgcagactctggaaccttttgatgagtatgaggaatggcatctgaaa
tgttctcattactttgtgttggctgcatcaaaggggatggaaccttcctggactccgttg
tcacccagtgtagcagttcctggtcctgttgggatggcagggagtgtctctgcagcagtg
tgtgcaaggctctcaggaattcctggcctgagacgttacggtcaccactctgttcttata
aagcccaacgtgattctcaccatgggaggctttggggaggaggatggacaacactgccgc
gtgagaaatttccacgtgctgagtaagcatgcaggccactgggaagctgtctgtgtggca
cagaatattcctgataaaagatggggtgagaggttgtaccatactgtgtcttgtctctcg
gacactctggctctggtggtaggaggacgaacatctccatcgagcacaggcttgggaatg
ttgtggctgaagttccccaaaacctgtgatgcttcaggcccagatgacgttgcagtggag
cttgtaagcctgcagcctgctgctgaagcagcagctttgcgttggagacacagcacaact
gaaattacattcaaaggtgagcagtacctgtttgtgtatggtggccgctctgctctggag
cctgtgctcggggattggcatttcctgcacgcaccagaactctcctacactgcgattgct
gttgagggtccagtcccagaaagccgccactctcacagtgcctgcagctgggaaggaggt
gtgctgattgcaggaggtctgggagcagctgagcagcccttgggttcagttttcctgctg
agggagcttgaacatggctttcagtggcagacaatagagacacaccctcctcttgtccca
aggtattcacatactgcacatgtgcatgaaggaaagcttctgctcgttggtggagtgtgg
tttcatgcaccctctgtgccaggtgtcactgtcatcgacttaatgactggtctctgtttg
aactataggattaatgtggagcacctggagtggccattaatgctacataatcatagcagt
gtctttctgccaaatgaaaaggagctgttggttattggcggtggtggaaactgcttctcc
tttgggacacacttgaacccagagcctgtcttgctgagcctcagcagcatcctgaccagt
cactga
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