Vidua macroura (Pin-tailed whydah): 128804610
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Entry
128804610 CDS
T11570
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2 isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc03008
Ribosome biogenesis in eukaryotes
vmc03018
RNA degradation
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128804610
NCBI-ProteinID:
XP_053828484
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Position
3:complement(39339277..39371710)
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AA seq
967 aa
AA seq
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MGVPAFFRWLSRKYPSIIVNCVEEKVKECNGVKVPIDTSKPNPNEVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAEEKQKIRQEILAKGGYLPPEEVKERFDSNCITPGTEFMDNLAKCLRYYITD
RLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQFADTLPISEQE
FIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQKE
KRKRLKRDQPSFIPGGQFSPQALGNRSSPQAICNPRQAAFEMRMHDRQNSTTSASPNTSL
TPDGSPSLGGGGVKRKPEDSDSEPEPEDNIRLWESGWKQRYYKNKFDVDASDEKFRRKVV
QSYVEGLCWVLRYYYQGCASWNWYYPFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLM
GVFPAASGNFLPPTWRKLMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLR
AALEEVYPDLTPDESRRNSLGGDVLFVGKHHPLCDFIVEQYKTKNTEAVDIPPELCHGIQ
GKLTLNDNAVLPDQVVQSPVPMLRDLTQNSAVSISFKDPQFAEDFVFKATVLPGAKKPAP
VLKPGDWEKTSSDGRPWRPQLGFNRDRKPVHLDQSAFRTLGHTMPRDRGMPGMYSNAVPL
GAYGSPYARPLMGSQQQIPKLLSNLRPQESWRGPTPLFQQTPQSVVSLHRTAGAAPLLAW
NRMLQSPNQFQPAQYQGLGPMGYPQRPEDRMDRGRQAYGPGRPYPLPPPAGRDWKESDKV
GVLRCCP
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgggggtcccggccttcttccgctggctcagccgcaagtatccctccattatcgtcaac
tgcgtcgaggagaaggtcaaagagtgcaatggtgtcaaggtccccattgacacaagcaag
cccaaccccaacgaggtggagttcgacaacctctacctggacatgaacggcatcattcac
ccctgcacacacccagaggacaagccagcacccaaaaatgaagatgagatgatggtggcg
atttttgagtatatcgacaggatcttcaacattgtgagaccaaggagactcctttacatg
gccatagatggagtggccccacgtgccaaaatgaatcaacagcggtccaggcgattcaga
gcctcaaaggagggcatggaagctgctgaggagaagcaaaaaatccgacaagaaattctg
gccaaaggtggctatctgccgccagaggaggtgaaggagaggtttgacagcaactgtatc
accccgggaactgagtttatggacaatcttgctaaatgtctccgctattacatcactgac
cgcttgaacagcgacccaggctggaagaacctgacagttattttgtcagatgccagtgct
cctggtgaaggggagcataaaatcatggattacatcaggagacaaagagctcaacccaac
cacgacccaaacactcaccactgtctgtgtggggctgatgctgatctgatcatgcttggc
ttagctacacatgaaccaaacttcaccatcattagggaagagttcaaaccaaacaaaccc
aagccatgtgctctctgtaaccagatggggcatgaggttaaggattgccaaggtctgccc
agagagaaacaaggaaagcacgatcagtttgccgacaccctgccgatctcagagcaagag
ttcatcttcatccgcctatgtgtcctgcgagagtatttggagagagagctcaccatggcc
agcttgcctttcacttttgattttgaaaggagtgttgatgactgggtcttcatgtgcttc
tttgtggggaatgacttccttcctcatctgccttctctggagatcagggagggagcaatc
gatcgcttggttaacatctataaaaacgtggtgcacaaaaccgggggctacctgactgaa
agtgggtttgtgaacctgcagcgggtccagatgatcatgttggctgttggggaagttgaa
gacagtattttcaaaaagaggaaagatgacgatgataactttaaaagacggcaaaaagaa
aaaaggaagagattgaagagggatcagccttcctttattcctggtggtcagttttcccct
caggccctgggaaatcgatccagccctcaagcaatctgtaaccctcgacaagctgccttt
gagatgaggatgcacgacaggcagaactcaacaacttcagcatctccaaacactagcctg
actcctgatggcagcccatccctgggaggaggaggagttaagcggaaacctgaggacagt
gacagtgaacctgagccagaggataatatcaggttgtgggaaagcggttggaagcagcgc
tactataaaaacaaattcgatgtggacgcatcagatgagaaatttcgtcgcaaggttgtg
cagtcctacgtggaagggctttgctgggttctcagatattattatcagggctgtgcatcc
tggaactggtattacccttttcactacgctccctttgcctcagactttgaaggcatcgca
gacatgccttcagactttgagaagggctccaaaccgttcaagcctcttgaacagctgatg
ggggtgttcccagccgccagtggaaacttcctgccgccaacttggaggaaactcatgaca
gacccagaatcaagcatcattgacttctaccctgaagattttgctattgatctgaatggg
aagaagtatgcttggcaaggtgtggcattgttgccctttgtggatgagcgacgcctaaga
gctgccctggaggaagtgtaccctgacctcactcctgacgagagcaggaggaacagcctt
ggcggtgatgttctctttgtcgggaagcaccatccactctgtgacttcattgtggagcag
tacaagaccaagaacacagaggcagtggacatcccaccggagctgtgccacggcatccag
ggaaagctcaccctgaacgacaacgccgtccttccggatcaggtggtgcagtctcctgtt
cccatgctgcgggatctgacacagaactctgcagtcagcatctcattcaaagatccacaa
tttgctgaagacttcgttttcaaggctacagtgttacctggagcaaagaaacctgctcca
gttctgaagccaggtgactgggaaaaaaccagcagtgatggcaggccttggagaccacag
cttggctttaacagggacaggaaaccagtgcatttggaccagtcagcgttcagaaccttg
gggcacacgatgccgagggacaggggcatgccagggatgtactccaacgcggtgccactc
ggagcctacggcagcccctatgccaggcccctcatgggcagccagcagcagatccccaaa
ctgctgtcaaatcttcggccccaggagtcctggagaggtcccacacccttgttccagcag
acaccacaaagtgttgtttccttgcacagaaccgccggagctgctcctctcctcgcctgg
aaccgcatgctgcagtccccaaaccagttccagccagctcagtaccaggggctggggccc
atgggatacccacagagacccgaggaccgcatggacaggggcagacaggcatacggccct
gggaggccctacccgctcccacctcccgcaggaagggactggaaagagtcggacaaggtg
ggagtgctgcgttgttgtccttaa
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