Vidua macroura (Pin-tailed whydah): 128804641
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Entry
128804641 CDS
T11570
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04517
IgSF CAM signaling
vmc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128804641 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128804641 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
vmc04812
]
128804641 (SPTBN1)
Cytoskeleton proteins [BR:
vmc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128804641 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
128804641 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
LPD22
Motif
Other DBs
NCBI-GeneID:
128804641
NCBI-ProteinID:
XP_053828569
LinkDB
All DBs
Position
3:complement(38657455..38775285)
Genome browser
AA seq
2359 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAESPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPGEKIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNYH
LECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEK
LESEHPDQAQAILSRLAEISDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRT
QTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKNR
EAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWDELESTTQTKAQRLFDANK
AELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQS
QARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILWV
GERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITESSPNAEV
IQQRLADLKQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYAG
LKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVRD
LMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKH
YASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSS
REIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPPT
PEPKVAEDGDSQKQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRMSSKES
SPIPSPTSDRKAKSGVQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRSWHN
VYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKDAVCEVAVDYKKKKHVFKLRLTDGNE
YLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSPGKR
EKDKEKDKEKRFSLFGKKK
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacagtagcgacagattatgacaacattgaaatccaacagcagtacagcgat
gtcaacaaccgctgggatgtcgacgactgggacaatgagaacagttctgctcggctgttt
gagcgctcccgcatcaaagccctggctgatgaacgtgaggcagttcagaagaagaccttc
acaaagtgggtgaattcccacttggctcgtgtgtcctgccgaattacagacctgtacact
gaccttcgagatgggaggatgctcatcaaactcctggaagtgctttcaggagagagactt
cctaaaccaactaaaggaaggatgcgcatccattgcctggagaatgtggataaagccctc
cagttcctgaaagagcaacgagtgcacctagaaaacatgggatctcatgatattgtggat
gggaatcacaggctgacacttggccttatttggaccattatcttgagattccagatccaa
gatatcagcgttgaaactgaggacaacaaagagaagaaatctgctaaagatgctttgctt
ttgtggtgccagatgaaaacagctgggtaccccaacgtcaatatccacaactttacgaca
agctggagggatgggatggcgttcaatgcactgatccataagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaacgcacactacaatctgcagaatgcttttaacctt
gcagagcagcaccttggtcttaccaagctcctggaccctgaggatatcagtgttgatcac
cctgatgaaaagtcaatcatcacttatgtggtgacatattaccactacttctccaagatg
aaagctttggctgtcgaaggaaaacgtattggaaaggtgcttgacaatgccattgaaaca
gagaaaatgatagaaaaatatgagtccctggcttctgacctgctggagtggattgagcaa
accattatcatcctcaacaatcgcaaattcgccaactccctggttggggtgcagcagcag
ctgcaggcgttcaacacttatcgcacagtggagaaaccacccaagtttacagaaaaagga
aacctggaagtgctgctttttaccatccaaagcaaaatgagagccaacaatcagaaagtg
tacatgccaagggagggcaaactcatctctgacattaacaaggcctgggaaagactggaa
aaagctgaacacgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacggagattcgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcaacgtcttgtttctcaggacaattttggctttgacctcccagcagtggaggctgcc
acgaagaagcacgaggccatcgagacggacatcgcagcgtatgaggagcgggttcaggcc
gtggtggcggtggcgaaggagcttgagactgaaaactaccacgacatcaaacgcatcact
gcaaggaaggacaatgttatccgcctgtgggagtatctcctggagctgctccgggcacgg
agacagcggctggagatgaaccttgggctgcagaaaattttccaggaaatgctgtacatt
atggactggatggatgagatgaaggtacttttgctgtcccaagactacggcaaacatttg
ttgggagttgaagacctgctgcagaaacacgctctggtggaagctgacattgctattcag
gctgagagagtgagaggggtcaatgcctctgctcagaagtttgccactgatggagaaggt
tacaagccctgtgacccgcaggtgatcagggaccgcgtggctcacatggagttctgctac
caggagctctgccagctcgcagccgagcgccgtgcacgcctcgaggagtcccggcgcctc
tggaaattcttctgggaaatggctgaagaggagggctggatcagggagaaggagcagatc
ctgtcatctgatgactatgggaaggacctaaccagtgttgtccgactcttgagtaaacac
aaggcgtttgaggatgagatgagtggccgcagcggccactttcagcaggcgataaaagaa
ggtgaagacatgattgcggaagagcattttgggtctgagaagatcagagaaagaattaag
gatatccgggagcagtgggctaacctggagcagttatctgccattaggaagaagcggcta
gaggaagcctctctccttcaccagttccaggctgatgctgatgacattgatgcatggatg
ttggacatcctcaagattgtctccagtaatgatgttggccatgatgaatattccacgcag
tccttggtcaagaagcacaaagatgtggctgaagagattgcgagctaccggccgaccatc
gactctcttcatgagcaggccaaggctctgccacaggagcatgcggagtctccagatgtg
caaggcaggttgtctggaatcgaggagagatacaaagaggttgctgagctgacccggctg
cgtaaacaggccctgcaggataccctcgctctctataagatgttcagtgaggcagatgct
tgcgagctttggatcgatgaaaaggagaagtggctgaataatatgcagattccagagaag
ctggaggacctagaagtgatccagcacaggtttgaaagcttggagccagaaatgaacaac
caggcatcccgtgtggccgtggtgaaccagattgccaggcagctgatgcatagtggccac
cccggggagaagatcaaagcacagcaagataaactcaacacaaggtggagccagttcaga
gaactggtagacaggaagaaggatgctctgctctctgctctgagtatccagaactaccat
cttgaatgtaatgaaaccaaatcctggatcagggaaaagactaaagtgattgaatccaca
caagacctgggtaacgacctggctggagtgatggccttgcagaggaagctgacgggcatg
gaacgggacctggtggccatcgaagccaagctcagtgacctgcaaaaggaggcagagaaa
ctagaatcggagcatcctgaccaggcacaagcaattctttcacggcttgcagagatcagt
gatgtgtgggaagaaatgaagaccacgctgaagaaccgggaagagtccctgggagaggcc
agcaagctgcagcagttcctgagagatctggatgacttccagtcctggctctccagaaca
cagactgcaattgcctccgaagatatgcccaacaccctgacagaggctgagaagctactc
actcagcatgagaatatcaagaatgaaatcaacaactacgaggaagattatcagaagatg
agggacatgggagagatggtgacacaagggcaaactgatgctcagtacatgttcctacgc
cagcgcctacaggctttggacaccggatggaatgagcttcacaaaatgtgggagaacagg
caaaatctcctttcccagtctcatgcctaccagctgtttctcagagataccaagcaggca
gaagctttccttaataaccaggagtatgttctggcgcacacggagatgccaaccaccttg
gaaggagcagaagctgctattaaaaagcaggaggatttcatgaccaccatggatgccaat
gaagaaaagatcaatgcagttgtggagacgggcaggaggctcgttagtgatgggaacatt
aactctgataaaatccaggagaaagtggactctattgatgacagacataggaagaaccgt
gaagcagccagtgaacttttgatgagactgaaagataacagggatctccaaaagtttctt
caggattgccaagagctctccctctggatcaatgagaagatgctcacagcccaggatatg
tcctatgatgaggcgaggaacctacacagcaaatggctgaagcatcaggcattcatggca
gagcttgcatccaacaaagagtggctggagaagattgaaaaggagggaatgcagctcatt
gcagagaaaccagagactgaggccgtggtgaaggagaagctgacaggtctccaccaaatg
tgggacgagcttgaatccaccacccagaccaaggctcagcgtctctttgatgcaaacaag
gcagagctttttacccagagctgtgcagacctggataagtggctgaatggtttggagagc
caaatccagtcagatgactacggaaaagatctcaccagtgtcaacatcctgttgaagaag
cagcagatgctggagaatcaaatggatgtccgtaagaaggagatagaggagctgcaaagc
caggcaagggctttgagccaagagggcaagagcacagatgaagttgatggcaaacgcctt
actgtagaaaagaaattcttggagctgctggagcctttgaatgagagaaaggccaacctg
ctggcctccaaagagatccaccagttcaaccgggatgtggaagatgaaattttgtgggtc
ggagagaggatgcccatagctacatctactgatcatggacacaacctccagactgtgcag
ctactaataaagaaaaatcagacccttcagaaagaaatccagggtcaccagcctcgtatc
gatgacatttttgagaggagtcagaacattatcacagagagcagccccaatgctgaagtc
attcagcagagacttgcagacttgaagcagctgtggaacctcctcatcgaggagacagag
aagcgccacaagcgtctggaggagtctcacagagctcagcagtattactttgatgcagcc
gaggctgaggcctggatgagtgagcaggagctctacatgatgtcagaagagaaagccaag
gatgaacagagtgcagtgtccatgctgaagaaacaccagattttggaacaagctgtagaa
gattatgctgaaactgtgcaccagctttcaaagaccagcagaactttggtggcagataat
cacccagaaagcgagcgtatcagcatgcgccagtccaaggtggacaagctctatgcgggc
ctgaaggaccttgctgaagagaggaggggcaagctggacgagaggcaccggctgttccag
ctcaaccgcgaggtggatgacctggagcagtggattgccgagagggaggtggtggcaggg
tcccatgagctgggccaggactacgaacacgtcacgatgctgcaggagcggttccgggaa
ttcgcccgggacaccgggaacatcgggcaggagcgggtggatactgtcaaccacatggct
gatgaactcatcaactccggccactcagacgctgccacgatcgctgagtggaaggatgga
ctcaatgaggcctgggcggatctcctggagctcattgacacaagaacacaaatccttgca
gcctcttatgaactgcacaaattttaccatgatgccaaggagatcttaggacgtatccaa
gacaaacataagaaactgcctgaggagcttggtagagaccaaaacacagtggaaacacta
cagagaatgcacacgacatttgagcatgatatccaggccctgggcacccaggttcgacag
ctgcaggaggatgcagcacgcctccaggctgcctacgctggggacaaggccgatgacatc
cagaagagggaaaatgaggtcctagaggcatggaaggcactgctggatgcctgtgagggc
cgcagggtgaggctggtggacacaggagacaaattccgcttcttcagcatggttcgggat
ctcatgctctggatggaagacgttatccggcagatagaagcccaggaaaagccaagggat
gtttcatctgtggaactcctcatgaacaatcaccaggggatcaaagcagaaattgatgcc
cgaaatgacagcttcactacgtgcattgagcttggcaagtctctgctggccaggaaacac
tatgcatctgaggagatcaaggaaaagctcctgcagctgacagaaaagagaaaagaaatg
attgacaaatgggaagacagatgggagtggctgagactgattttggaggtgcaccagttc
tccagagatgcaagcgtggctgaggcctggctgctgggacaggagccctacctgtccagt
cgtgaaatagggcagagcgttgatgaggtggagaaattaatcaagcggcacgaagccttt
gagaaatctgcagctacctgggacgagaggtttgcagcgctggagagactgaccacgctg
gaactgctggaggtgcgtcggcagcaagaggaggaggagcggaagaggcagccgcccact
ccggagcccaaggttgcagaggatggagactcccagaagcaatgggatgggacaaaagga
gaacaagtttcccaaaatggtttgccctcagaccaggaatctccacgggtggcagaaact
gcagaaaccaatgaaatggtcaatggagctgcagaacagaggatgagttccaaagagtcc
agtcccattccttccccgacatcagaccgcaaagccaagagcggcgttcaggcccagact
gctgctaccctcccagccaaaacgcaggagatcccctcagcccagatggagggcttctta
caccgcaagcatgagtgggagacacacagcaagaaagcctccagcaggtcatggcataat
gtgtactgtgtcataaacaaccaagagatgggcttctacaaggactcaaaagctgctgct
tctggcatcccttaccacaacgagatccctgtcagtttgaaggatgcagtctgtgaagta
gcagtcgattacaaaaagaagaagcatgtgttcaagctcagattgaccgatggcaatgaa
tacctcttccaagccaaagacgatgaggagatgaacacgtggattcaggccatcacatca
gcgatctcttcagacaaaatcgaagtgtccccgaccacccagagcactccagcctccagc
cgtgcccagaccctgcctgccagtgtcacaataaccagcgagtccagccctggcaagcgg
gagaaagacaaagagaaagacaaagagaaaagattcagcctttttggtaaaaagaagtga
DBGET
integrated database retrieval system
