Vidua macroura (Pin-tailed whydah): 128804874
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Entry
128804874 CDS
T11570
Symbol
SOS1
Name
(RefSeq) son of sevenless homolog 1 isoform X1
KO
K03099
son of sevenless
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04010
MAPK signaling pathway
vmc04012
ErbB signaling pathway
vmc04068
FoxO signaling pathway
vmc04150
mTOR signaling pathway
vmc04510
Focal adhesion
vmc04540
Gap junction
vmc04810
Regulation of actin cytoskeleton
vmc04910
Insulin signaling pathway
vmc04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128804874 (SOS1)
04012 ErbB signaling pathway
128804874 (SOS1)
04068 FoxO signaling pathway
128804874 (SOS1)
04150 mTOR signaling pathway
128804874 (SOS1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128804874 (SOS1)
04540 Gap junction
128804874 (SOS1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128804874 (SOS1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
128804874 (SOS1)
04912 GnRH signaling pathway
128804874 (SOS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
RhoGEF
SOS1_NGEF_PH
PH
PH_19
PH_10
IQ_SEC7_PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
128804874
NCBI-ProteinID:
XP_053829133
LinkDB
All DBs
Position
3:3296297..3340389
Genome browser
AA seq
1322 aa
AA seq
DB search
MQAQPLLYEFFSEENAPKWRGLLVPALKKVQVQVHPKLSSTEDALQYVEELILQLLNMLC
QAQPRSFLDVEDRVQKSFPHPIDKWAIADAQSAIEKRKRRNPLSLPVEKIHPLLKEVLGY
KIDHQVSVYIVAVLEYISADILKLVGNYVRNIRHYEITKQDIKVAMCADKVLMDMFHQDV
EDLSALTLSDEEPSTSGEQTYYDLVKSFMAEVRQYIRELNLIIRVFREPYASNSKLFSSH
DVENIFSRISDIHELSVKLLGHIEDTVEMTDEGSPHPLVGSCFEDMAEELAFDPYESYAQ
DILRPGFHDHFLSQLSKPGAAFYLQSIGEGFKEAVQYVLPRLLLAPVYHCLHYFELLKQL
EEKSEDEEDKECLKQAITALLNLQSSMERICSKSLAKRRLSESACRFYTQQMKGKQLAIK
KMNEIQKNIDGWEGKDIGQCCNEFIMEGTLTRVGAKHERHIFLFDGLMICCKSNHGQPRL
PGASNAEYRLKEKFFMRKVQINDKDDTNEYRHAFEIILKDENSVIFAAKSAEEKNNWMAA
LISLQYRSTLERMLDVTMLQEEKEEQMRFPNPELYRFAEPDSEENIVFEENMQPKSGIPI
IKAGTVVKLIERLTYHMYADPNFVRTFLTTYRSFCRPQELLSLLIERFEIPEPEPTEADR
IAMENGDQPLSAELKRFRKEYIQPVQLRVLNVCRHWVEHHFYDFERDADLLKRLEEFIGT
VRGKAMKKWVESITKIINRKKQAQAIGPSHNITFESPPPAIEWHISKPGHTETFDLLTLH
PIEIARQLTLLESDFYRAVQPSELVGSVWTKEDKEINSPNLLKMIRHTTNLTLWFEKCIV
ETENLEERVIVVSRIIEILQVFQELNNFNGVLEIVSAMNSAAVYRLDHTFEQIPSRQKKI
LEEAYELSEDHYKKYLAKLRSINPPCVPFFGIYLTNILKTEEGNPEFLKRHGKDLINFSK
RRKVAEITGEIQQYQNQPYCLRVEFDIRRFFENLNPMGNSVETEFTDYLFNKSLEIEPRN
VKPPPRFPKKYSYPLKSPGVRPSNPRPGTMRHPTPLQQEPRKISYSRIPESEAEATASAP
NSPRTPLTPPPASATSSTTDACSVFDSDPSSPFHTRSASVSSINFTKTSDDAPVPPPVPP
RRRPESAPAESSPSKITSAHLDNPPAIPPRQPTSKVYSPRYSVPDRTCISDSCVTTANPP
ELPPREPVRTPDVFSSSPLHLQPPPLGRKSELGNTFFPNSPSPFTPPPPQTPSPHVARRH
LPSPPLIPQDVELPSVAGPPVPPRQSTSQHIPKLPPKTYKREHTHPSMHRDGPPLLENAP
SS
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgcagccgctgctctacgagttcttcagcgaggagaacgcgcccaagtggcgg
gggctgctggtgcccgccctcaagaaggttcaggtgcaagtccatcctaagctttcctct
actgaagatgcattgcagtatgtggaggagttaattcttcaattgttaaatatgttgtgt
caagctcaaccaagaagttttctggatgtagaggatcgtgttcaaaaaagtttcccccat
cctattgataagtgggcaatagctgatgcccagtctgctattgagaagaggaaacgaagg
aatccgttatctcttccggtagaaaaaatccatcccttgttaaaggaagttctaggctac
aaaattgaccaccaagtgtctgtttacatagtagcagtattagaatacatttctgcagac
atcttaaaactggttgggaattatgtgcggaatataagacattatgagattacaaaacaa
gatattaaagtagcaatgtgtgctgataaggtattaatggatatgttccatcaagatgta
gaagatttaagtgcactaactttatctgatgaagaaccctccacctcaggggagcaaacc
tattatgacctagtgaagtcatttatggcagaagttcgacaatatataagggaactgaat
ctcattatcagagtttttagagagccatatgcctccaactccaaactgttttcatctcat
gatgtggaaaatatatttagtcgtatatcagacatccatgaacttagtgtgaagttactg
ggtcatatagaggacactgttgaaatgacagatgaaggtagtcctcacccactagtaggc
agctgttttgaagatatggcagaggaactagcatttgatccatatgaatcatatgcacaa
gatattttacgacctgggtttcacgatcattttctaagtcaattatcaaagccaggagca
gcattttatttacagtcaataggtgaaggctttaaagaagctgttcagtatgttctaccc
cggctcctcctcgcccctgtttaccactgtcttcattattttgaactgctaaaacaattg
gaagaaaaaagtgaggatgaagaggataaggagtgcttgaagcaagcaataactgccctg
ctaaatcttcaaagcagtatggaacggatatgctccaaaagccttgcaaaacgaaggctt
agtgaatccgcatgccggttctatactcagcagatgaaggggaagcagctagcaattaag
aaaatgaatgaaatccagaaaaacattgatggttgggagggtaaagacattggacagtgc
tgtaacgagttcatcatggaaggaacactcacacgtgtaggagcaaagcacgagagacac
atattcctgtttgatggcttgatgatttgctgtaagtcaaatcatggccagccaagactt
cctggtgctagcaatgcagaatatcgactcaaggagaagttcttcatgcgaaaggtacaa
atcaatgataaagatgacactaatgagtatagacatgcttttgaaatcatcttaaaagat
gagaacagtgttatttttgctgctaaatcagctgaagagaaaaacaactggatggcagca
ttgatatctttgcaatatagaagcacgctggaaaggatgttggatgtgacaatgttacag
gaagaaaaagaggagcagatgagatttccaaatcctgagctttatagatttgcagaaccc
gactctgaagagaatattgtgtttgaagagaacatgcagcccaaatctggaatccccatc
atcaaggcaggaactgttgtgaagctcatcgagaggctgacataccacatgtatgcagat
cccaactttgttcggacttttctcacaacatatagatccttctgtagacctcaagagttg
ctgagtttgctaatagaaagatttgaaattccagagcctgagcccacggaagccgaccgt
atagccatggagaacggagaccagccccttagcgcagagctgaaacggtttaggaaggag
tacattcaacctgtgcagctgcgagtattaaatgtgtgtcgacactgggtagagcaccat
ttctatgactttgagagagatgctgaccttctgaaacgtttggaggagttcattggaaca
gtaagaggcaaagccatgaagaagtgggttgaatccatcacaaagataatcaacaggaaa
aagcaggcacaagccattgggccgagccacaacatcacttttgagagcccccctccagca
attgagtggcacatcagcaaaccaggccacacagagacttttgacttgctcactctgcat
cccatagaaatcgctcggcagctcactttgctggagtcagatttttacagagctgtgcag
ccatcagaactagttggaagtgtgtggacaaaggaagataaagaaattaattctcccaac
cttctcaaaatgataaggcatacaactaacctaactctgtggtttgagaaatgcattgta
gaaacagaaaacctagaggaaagagtaattgtagtgagccggataattgagatcctgcaa
gtttttcaagagctaaacaactttaatggtgtccttgagattgtcagtgctatgaactcc
gcagcagtttataggttggatcacacatttgagcaaattccaagtcgccagaagaagatc
ttagaagaagcttatgagctgagtgaggaccattataagaaatacttggcaaaactcagg
tccattaatcctccttgtgtgcctttttttgggatttacttaaccaacattttgaaaaca
gaagaaggcaatcctgaatttctcaagcgccatgggaaagaccttataaacttcagcaag
aggaggaaggtagctgagataacaggggagatccagcagtaccagaaccagccatattgt
ttaagagtggaatttgacatcaggagattttttgaaaacctgaatccaatgggaaacagc
gtggagacagaatttacagattatctgttcaacaagtcactggagatagagccacgaaat
gtcaagcctcctccaagatttcccaagaagtacagctatcctctcaagtccccgggtgtt
cgtccctctaacccaaggccaggtaccatgagacatcccacccccctgcagcaggagcca
aggaaaatcagctacagccgcatcccggagagtgaggcggaagccacggcgtctgcgccg
aactcgccgcgcaccccgctgaccccacccccggcttctgccacttccagcaccaccgac
gcctgcagcgtcttcgactcggacccctccagccctttccacacaagatctgcttctgtg
tcatccataaactttaccaaaacttcagatgatgctcctgtccctcctcctgttcctcca
cgaagaagaccagaatctgccccagctgaatcctccccatcaaaaattacttctgcacac
ctggacaacccaccagcaatccctcccaggcaaccaacctctaaagtgtattctccaagg
tactcggtgcctgatcggacctgcatctctgactcctgtgttaccactgcaaaccccccc
gagttaccgccacgggagcctgtgcgaactccagatgttttctctagctcaccactacac
ctccagcctccacccctggggagaaaaagcgaacttggtaacacctttttcccaaacagc
ccctctccgttcacgccccctcccccccagacaccttctccacatgtagcacggaggcac
ctgccgtcgccgcctttgataccgcaggatgtggaactcccttctgttgctggaccaccc
gttcctccacgacaaagcacttctcaacatatcccaaagcttcctccaaaaacttacaaa
agggagcacacgcacccatcgatgcatcgggatgggccacccttgctggagaacgccccc
tcctcctga
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integrated database retrieval system