Vidua macroura (Pin-tailed whydah): 128805100
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Entry
128805100 CDS
T11570
Symbol
TMC2
Name
(RefSeq) transmembrane channel-like protein 2
KO
K21988
transmembrane channel-like protein
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
128805100 (TMC2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vmc02000
]
128805100 (TMC2)
03037 Cilium and associated proteins [BR:
vmc03037
]
128805100 (TMC2)
Transporters [BR:
vmc02000
]
Other transporters
Pores ion channels [TC:
1
]
128805100 (TMC2)
Cilium and associated proteins [BR:
vmc03037
]
Other cilia and associated proteins
Stereociliary proteins
128805100 (TMC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
TRAP_beta
Motif
Other DBs
NCBI-GeneID:
128805100
NCBI-ProteinID:
XP_053829556
LinkDB
All DBs
Position
1:complement(44223894..44254968)
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AA seq
934 aa
AA seq
DB search
MGKKKKSSLQVILEDAGIEFDGEVETDTESEEDEVKDKKTNKQPLRETGRASRLQSKKQE
KDKEEKEDEQDESKEEDNGSQQNRASRRTNYQRKNRNGKKAREEGSQQKERGKTAPNKDQ
KESENKEKKTTKRGKEGENKQKKGRKNSTTSASSNSSDEESLSEEELAMLKEQVEQKKKL
ISTMRNKPWRMMKKLSVLREAQDFVEKFEGALGKGKGKKLYAYKMMMAKKWVKFKRDFEN
FKTQCIPWEMKIKEVESHFGSSVASYFIFLRWMYGVNLVLFGLIFGLVIIPEVLMGMPYG
SLPRKTVPRAEQATAMDFSVLWDFEGYIKYSALFYGYYNNQRTIGWLKYRLPMAYFMVGI
SVFGYSLMVVIRSMARNANESTADGDDDNFIFSWKMFTSWDYLIGNPETADNKFASITTS
FKESIVDEQESNKDENIHLRRFLRVLANVLITCCLCGSGYLIYFVVKRSQTFSKMQNVGW
YERNEVEIVMSLLGMFCPPLFETIAALENYHPRIGLKWQLGRIFALFLGNLYTFLLALMD
DVNEKLAEEDVVKNITHWTLLGHHNSSAGNDSTVTPPPLDPADVPRGPCWETTVGIEFVR
LTVSDILVTYITILVGDFIRACFVRFVNYCWCWDLEAGFPSYAEFDISGNVLGLVFNQGM
IWMGSFYAPGLVGINVLRLLTSMYFQCWAVMSSNVPHARVFKASKSNNFYMGLLLLILFL
SLLPVAYTIMSLPPSFDCGPFSGKKKMYDVIQETIELDFPLFVAKIFSYVANPGLIIPAI
LLMVLTIYYLNAVSKAYQRANAELKKKMQMQREEEKNKRNNKASTNPMLQDLEDLLTPST
KTESPPKQAEDNKIESPNGTSPARKPGRGEVLAGSPMAIGRGAAFTPPSQVFVTQPRTLG
VWAPYPGQPRPWGHPLGPVPGRGRGHPCYPRAAR
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaaaagaaaagttctctacaggtcatcctggaagatgctggaatagagttt
gacggagaagtggaaactgacacagagagtgaagaagatgaagtaaaggacaagaaaact
aacaaacaacccctcagggaaactggcagagcaagcagacttcaaagcaaaaagcaagag
aaagacaaagaagaaaaagaagacgaacaagatgagagcaaagaggaagacaatggcagc
caacaaaacagagcttctaggagaacaaattaccaaaggaaaaacagaaatggaaaaaag
gcaagagaggaaggaagccagcagaaagagagaggcaaaacggctcctaacaaagatcaa
aaggaatcagaaaacaaagaaaagaaaacaaccaagagagggaaggagggggagaataaa
cagaagaaaggcaggaaaaacagtactacttctgcttcctccaactcatctgatgaggag
tcactgtcagaggaagagctcgcgatgctgaaggagcaggtggagcaaaagaaaaaactg
atttccaccatgaggaacaagccctggaggatgatgaaaaagctctcggtgctcagggag
gcacaagattttgtagagaagtttgaaggagcactgggaaaaggaaagggcaaaaagttg
tatgcatataagatgatgatggcgaagaaatgggtgaaatttaagagagactttgaaaat
tttaaaactcagtgcataccgtgggagatgaagataaaggaagtggagagtcactttggc
tcctctgttgcttcctacttcatatttctgcggtggatgtatggagtaaatcttgtcctt
tttgggttaatatttggactggttataattccagaggtcctgatgggaatgccatatggg
agtttgccaaggaaaactgtaccccgggctgaacaagcaacagctatggatttttcagtt
ctttgggattttgagggctacatcaaatactcagcgctcttttatggctactacaacaac
cagaggacaattggctggttgaaatacaggctgccaatggcatatttcatggttggcatc
agcgtatttggctacagcctgatggttgttataagatcgatggctcgcaatgccaacgaa
agcacggcagatggggatgatgacaacttcattttcagctggaaaatgttcaccagctgg
gactacctcattggcaacccagagacagcagacaacaagtttgcatccatcaccaccagc
ttcaaggagtctattgtagatgagcaagaaagcaacaaagatgagaatatccacctaagg
aggttcctgcgagttttggccaatgtcctcatcacatgctgcttgtgtgggagtggctac
ctcatttattttgtggtgaaacgctcccagacattttccaaaatgcaaaatgttgggtgg
tatgaaagaaatgaggttgaaattgtgatgtccttgctgggcatgttttgccctccactg
tttgaaaccattgctgcactagaaaattaccatccccgtattgggctgaaatggcagctg
gggcggatcttcgcgctcttcctggggaacctctacacatttttgttggccttgatggat
gatgtcaacgaaaaactggcggaagaggacgtggtaaaaaacatcactcactggacactg
cttggtcaccacaactcatctgcagggaatgacagcactgtcaccccacctccccttgac
cctgcagacgtgcccaggggaccctgctgggagacaactgtcggcatcgagtttgtgagg
ctcactgtgtctgatatcctggtgacctacataaccattctggtgggagatttcatacga
gcttgctttgtcagatttgtgaattactgttggtgctgggacctagaggctggatttccg
tcctatgcagagtttgacattagtggcaacgttttgggtttggttttcaaccagggaatg
atttggatgggatccttttacgcaccagggctcgtgggtataaacgtgctgcgcttatta
acctccatgtattttcagtgctgggctgttatgagtagcaatgtccctcatgcaagagtc
ttcaaagcatccaagtctaacaatttttacatgggattgctcctgctgatcctcttcctc
agcctcctgcctgtggcttacaccatcatgtcactgcctccctcctttgactgtggacct
ttcagtggaaagaaaaagatgtatgatgtcattcaagagaccattgagctcgattttcca
ctttttgttgccaagatcttcagctatgtggcaaatccaggactgatcatacctgcaatt
ctgctcatggtcctcaccatctattacctgaatgctgtgtctaaagcatatcagcgtgcc
aacgcagagctgaagaagaaaatgcaaatgcaacgagaagaggagaaaaacaagaggaac
aacaaagccagtacgaaccctatgctgcaagatctggaggatttacttacaccaagtaca
aagactgaaagtccccccaaacaagcagaagacaacaaaatagaatctccaaatgggacc
agccctgccaggaaaccaggcagaggagaagtcctggctggcagccccatggccattggg
agaggagcagcattcaccccgccgtcgcaagtgtttgtgacacagccacggacactgggc
gtttgggcaccctaccctggccagcccaggccatgggggcaccccctgggaccagtccct
ggaagagggagagggcacccatgctacccacgggctgctcgataa
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