Vidua macroura (Pin-tailed whydah): 128805126
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Entry
128805126 CDS
T11570
Symbol
PEX6
Name
(RefSeq) peroxisome biogenesis factor 6 isoform X1
KO
K13339
peroxin-6 [EC:3.6.4.-]
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
128805126 (PEX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vmc04131
]
128805126 (PEX6)
Membrane trafficking [BR:
vmc04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
128805126 (PEX6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DPBB_PEX6
PEX6_vert_N
AAA_16
AAA_lid_3
AAA_5
AAA_22
Mg_chelatase
nSTAND3
PEX6_4th
nSTAND_NTPase5
RuvB_N
Vps4_C
NPHP3_N
AAA_25
RNA_helicase
AAA_33
DUF815
bpMoxR
Parvo_NS1
TIP49
AAA_28
IstB_IS21
AAA_14
AAA_24
Motif
Other DBs
NCBI-GeneID:
128805126
NCBI-ProteinID:
XP_053829602
LinkDB
All DBs
Position
3:33199195..33213141
Genome browser
AA seq
971 aa
AA seq
DB search
MAVAVLRPLDAPPAELSPATALLLAPAGLCAALRGRGGALVLAVRPAGRGGAQPVLLSAV
ALEAGGRRGAELWLRGALLRRLGLAAGRRVAVWPVRRPPALAWVLLGAAGRAGRLAGGAV
LARRGEALPGPGPGPGPLVLEARPALQGLLGTGTRTALAPPPPAPPGTARGRPPSAASPP
LVSRFAAAGTGPRLRAVPGGTGGGGAEVWVSRRGLLALGLFQGEWVRVGAEGAAREHLAA
LLARPPPWEYPRAARRGLADGTALLAPALAFNLGCDPATAAHLRLQRYERTGAADGKGSR
SVLSVPPFAKELHLEIVCSPAYSTRGSYDCVLYRHFETPRLVQEGDILCVPTFGNAEFIE
LNAEKFLRWPELYFKVKKIVGMVEGEQSEGYLVDTQNTSLYLVGSTNSTIPSAPAYNSNE
FWSSLSPAGLSDVVKQLCDALRPHLNRRASALSSVGSVLLSGPSGSGKLMAVRAVCSCLN
LHLFKVDCVSLCSDTSAATEEKVQVAFKQAQQYQPCVLLLKDIEVLGRDRDGLGEDARVI
ATLRQLLLDRDPALSHPVLVIGTTCKPQNVPTDVQTAFLHEVKIEAPSEEQRRLMLSMLT
ASLPLGKEVSLSKLARRTAGFVLGDFCALLSHSSRAACTRIQALSFPGGLSEEVERDFCT
AGFPVLEEDFCAALDQLHDAHSQAVGAPKIPSVSWQDVGGLQEVKKEILDTIQLPLEHPE
LLSLGLCRSGLLLYGPPGTGKTLLAKAVATTCTMTFLSVKGPELINMYVGQSEENVRNVF
ARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSSRDVFVIGATN
RPDLLDPALLRPGRFDKLVYVGISEDRESQLQVLSAVTRKFKLDPSVNLTTILEKCPAQL
TGADIYALCSDAMMCAVKRKVEWIEEGLDTEKSALILTMEDFLQAAARLQPSVSEQELLR
YRLIQQKFAAS
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgtgctgcggccgctggacgcgccgccggccgagctgtcgccggccacg
gcgctgctgctggcgccggcggggctgtgcgcggcgctgcgcgggcggggcggcgcgctg
gtgctggcggtgcggccggcggggcgcggcggggcgcagccggtgctgctgagcgccgtg
gcgctggaggcgggcggacggcgcggcgcggagctgtggctgcgcggggcgctgctgcgg
cggctggggctggccgccggccgtagggtggccgtgtggcccgtgcggcgcccgccggcg
ctcgcctgggtactgctgggggcggcggggcgggcggggaggctggcgggcggcgcggtg
ctggcgcggcggggcgaggcgctgccggggccgggccccgggccgggcccgctggtgctg
gaggcgcgcccggcgctccaggggttgctgggcaccgggacgcgcaccgccctcgcgccc
ccgccgcccgccccgccgggcaccgcccgcggccgccccccgtccgccgcctcgccgccc
ctcgtctcccgcttcgccgccgccggtaccggcccgcggctgcgggcggtgcccggcggg
acgggcggcggcggcgcggaggtgtgggtgagccggcgcgggctgctggcgctggggctg
ttccagggcgagtgggtgcgggtgggcgcggagggggcggcccgcgagcacctggcggcg
ctgctggcgcggccgccgccctgggagtacccgcgggccgcccggcgcggcctggccgac
ggcaccgcgctgctggccccggccctggccttcaacctgggctgcgaccccgccaccgcc
gcacacctccgcctgcagaggtacgaaaggaccggcgccgcggatgggaagggcagccgg
tctgtgctgtctgtgcccccgttcgccaaggagctgcacctggagatcgtctgctcgccg
gcctacagcacccggggaagctacgactgcgtgctctacaggcacttcgaaacaccgcgg
ctggtccaggaaggagacatcctgtgtgttccaacatttggaaatgctgagtttatagaa
ctaaatgcagagaagttcctaaggtggccagagctttatttcaaggtgaagaagattgta
ggcatggtggaaggcgagcagtccgagggttacctggtggacacccagaacacgtctctc
tatctggtgggttcaacaaatagcactatcccatctgccccagcctataacagcaatgag
ttctggagcagtttgtctcctgcgggactttctgacgtcgtgaaacagctctgcgatgct
cttcggcctcacctgaaccgccgggccagtgcactgagcagcgtgggcagcgttctcctc
tcagggccaagcggcagcgggaagctgatggctgtcagagctgtgtgtagctgcctcaac
ctccacctctttaaggtcgattgcgtcagtttgtgcagtgacaccagtgcagccacagag
gagaaagtacaggtggccttcaagcaggcccagcagtatcagccctgtgtgctcctgctg
aaagacatcgaggtgcttggcagagaccgagacgggctcggagaggatgccagggtcatt
gctactctgaggcagctgctcctagacagagacccagcactgagccaccctgtcctggtg
attggcacaacctgcaagccccagaatgttcccacagatgtgcagactgctttccttcat
gaggtgaagattgaagccccttcagaggagcagaggaggttgatgctgagcatgctgact
gccagcctgcctctggggaaagaagtgagcctttccaagctggcccgcaggactgccgga
tttgtgctgggagatttctgtgccttgttgtcccacagcagccgggctgcttgcacccgc
atccaggccttgagttttccaggcggactgagtgaagaagtggagagggatttttgcact
gcagggttcccggtgctcgaggaagatttttgtgctgcactggaccagctgcatgatgcc
cattcacaggcagtgggagccccaaaaatcccctcagtgtcctggcaggatgttggtggg
ctgcaggaggtgaagaaggagatcctggacactatccagttgcccttggagcacccagag
ctgctgtcactgggtctgtgccgctctggtctgctgctgtatgggcctccagggacaggg
aagaccttgctggcaaaagctgtggcaaccacgtgcaccatgacattccttagcgtgaaa
gggccagagctcatcaacatgtacgttgggcaaagcgaggagaacgtgcgcaatgtgttt
gccagagctagggcagctgctccctgcattatcttctttgatgaactggattccctggcc
cccagtcgtgggcgaagtggagattcagggggtgtcatggacagagttgtctcacagctc
ctcgcagagcttgatggccttcattccagcagagacgtgtttgtcattggagccacgaac
aggcctgacctcttggacccagctctgctacggccaggcaggtttgacaagctggtctat
gtgggcatcagcgaggaccgggagtcgcagctgcaggtgctgagcgccgtcaccaggaag
tttaaactggatccttctgtgaatctcaccaccatcctagaaaaatgcccagctcagctg
acaggagcagacatctacgccctgtgttcagatgccatgatgtgtgctgtcaaacgcaag
gtggagtggattgaggaaggactggatactgagaagtctgctctgatcctgaccatggaa
gattttctgcaggctgctgccaggttgcagccatcagtctctgagcaggagctgctcagg
tacagactcatccagcagaagtttgcagcctcctaa
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