Vidua macroura (Pin-tailed whydah): 128805298
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Entry
128805298 CDS
T11570
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc03013
Nucleocytoplasmic transport
vmc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128805298 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128805298 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vmc03019
]
128805298 (NUP153)
Messenger RNA biogenesis [BR:
vmc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128805298 (NUP153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
128805298
NCBI-ProteinID:
XP_053830239
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All DBs
Position
1:complement(65751117..65795669)
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AA seq
1452 aa
AA seq
DB search
MASGGSGGGGGKIRTRRHHLGAAKPPYARGKQQLGLLSRVTESVKNIVPGWLQKYFNKRE
DKCVDMNESASEEENPVNYHHDYANEDAMVIDGRVTPESARINLEEPSTSRSALNFSDVL
TRPSLHRSHLNCTVLDSTVPHCQPSTSSTLGIGSPGLSLVKEIKDSTSQHDDDNISTTSG
FSSRASDKDITVSKNTSAPLLWSPEAERSHALSQHPASSSKKPAFNLSAFGSPSPSLGNT
SVFKTRQLGDSPFYPGKTSYGGAAAAARQTKVQISAYQPPIKRQMKAKQPNVQSYGVTSS
TARRILQTLEKMSSPLADAKRIPSSVSSPLSSPVDRSVLNVTSFQSRQNQVDSQHPPVQK
LVTPKPISLTGSRITYFKPSLKSATNSRKIHQRVDTDHQDMMEESFPAEKLVKSSESNLS
YPKLDTPASNGLSSGGRMDSACGKMRRERERYCASRPAQKQQLDMEQEALPEVPLPISTA
SLPKFNFSFPTSSAVSSSPSIVSKAVMNKVQPASNVGSPTFVFSSPIVKSTEVEVLPPLS
QIKFTFSVPVVKSSEISGSTDTPVTSILSPGSATVNSTSNKKEEEDDDGFCKPAKFLKQG
SVLDILKSPGFMSGKSPSCSSAQPVTSTVVYTRPAISSFSAGKDASKQASSFWQSDTHDP
CLQNKTTDGKCVTCEAPKVSAVESTKQTISVSPCVSSKTTVSTAGMLGFEDKFKPAPNTW
DCDTCLVQNKPEATKCIACETPKPGTGVMPALTMPVVMDSSVTVTSTSSSTGTTVTLGFG
DKFKQPKGSWNCSVCLLQNKAEDSKCVACQSEKPGSSVPVTSSSVCAFSASSGGFLDLDK
FKMPEGSWECEVCMVQNKAEATKCIACENAKPGTKAELKGSGTTTVSTNAAMPSFTFGVP
SSSSESSQTLGSTGNFKFGEQSSFKFGIASESASSNTVTGGFKFPTSSENFKFGVSSSDS
KSEDSKKESKSNSFTFGLPSTSSQAPSTFQFGTTSLGQQEKKEEPVLGGFGFATSSTSSI
ATNENKTGVGGFTFGTVAEKDAASPALPFKKSDEKKDETVSTKGGFSFGSVESAPASQFV
LGRAEEKQDPVTSAAPLAFGKKADNEDLKAQPIFSSGTAEHTKEESTAKPVFNFSFGKPL
EKESEQAKAPFAFGAPTSTCDQGASFSFLSSSSSSTVVPTTSANSSSVFGSTLSSSNPQP
VPTPFVFGQPSNTVTSSVFGNPAESATSQSFGFSQESKTATTSSSTGSTLTPFLFRSGES
STNAANSGFTFGATTTSNSTGSSSSFLFGSGPPAPAAGPAFGASQLPAFGPSPGSGQQSA
PSFGSLSTTLFSAGSQPAPSAFGSVTSSTQPSVFGQQAAHQPAFGSGTPSAGSVFQFGSN
TTNFSFPNNPGVFTFGANPPASAAPAPPSGTSGFSFSQPPTFTVGTNGKNVFSASGPSVA
GRKIKTAIRRRK
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggtggcagcggcggcggtggcggcaagatccggacccgacggcaccacctg
ggagccgcgaagccgccctacgcgaggggcaagcagcagctgggactccttagcagagtg
accgaatcagtgaaaaacattgtaccaggatggttgcagaagtatttcaataaaagggaa
gataaatgtgtagatatgaatgaatctgcaagcgaggaagagaatccagtaaactatcac
catgattatgcaaatgaagatgccatggtaattgatgggagagtcacgcctgaatcagca
agaattaatttggaagaaccatccacgagcaggtctgcactgaacttctcagatgtgtta
acaaggccctcccttcaccggagccatttgaactgcaccgtgctggattccacagtccca
cactgtcagccctccacatcttccacacttggcattggcagtcctgggctgtccctcgta
aaggaaataaaagattctacctctcagcatgatgacgataacatctcaacaaccagtggc
ttctcctctagagcatctgataaagatatcacagtttcaaaaaatacttcagcaccactg
ctctggtccccagaggctgaaagatctcatgccctctcacagcatcctgcatctagctct
aaaaaacctgcattcaatttgtctgcttttggatctccctctccttcacttggaaacact
tctgtctttaagacaagacagcttggggattctccattttacccaggaaagacctcttat
ggtggtgcagctgcagcagcgagacagacaaaagtccagatttctgcttaccagccaccg
ataaaaagacaaatgaaagctaaacaaccaaacgtgcaatcctatggtgtgacaagttcc
acagcacggcgcatcttgcagacattggagaagatgtcaagccccttggcagatgctaaa
aggattccatcttctgtttctagtccgctgtcttctcctgtggacaggagtgtgctgaat
gtgactagcttccaatccagacaaaaccaggtggattcacaacatcctcctgtccagaaa
cttgtgacaccaaagccaatctccctgacagggagtcggatcacgtattttaaaccatcc
ctgaaatcagctactaattccagaaaaattcaccaaagggtggatacggatcatcaagac
atgatggaggagagttttcctgcagaaaagcttgtaaaatcatctgaaagtaatttgagc
taccccaaactcgatactcctgcatccaatggtctgtcttcaggaggaaggatggatagt
gcctgtggcaagatgagaagggaaagggagcgatactgtgcatcaagacctgcacaaaaa
caacaactggacatggagcaagaagcgctacctgaagtaccccttcccatcagtactgca
tcgctgccgaagttcaacttcagtttccctaccagtagtgctgtctcctcatcacccagc
attgtttcaaaagcagtaatgaacaaggtacaaccagcaagtaatgttggcagtcctacg
tttgtattttcatctccaattgtgaaatctactgaggtggaagtgctacctcccttgtct
caaattaagtttacatttagtgttcctgttgtaaagtcatcagagatttctggatccact
gatacaccggtgacatccatccttagtccaggtagtgccactgtaaacagcaccagcaat
aagaaggaagaagaagatgatgatgggttctgcaaacctgctaagttcttaaagcaagga
agtgtgttagacattctaaaaagccccggctttatgtctgggaaatcaccctcctgttca
tctgcacagcctgttacgagcacagtggtctatacaaggcctgcaataagtagtttttct
gcaggtaaagacgcctctaaacaagcatcctcgttttggcagtctgacacacatgaccca
tgtctgcagaataaaaccacagatggcaaatgtgtaacatgtgaagctcctaaagtgtcc
gctgttgagagtacgaagcagacgatcagtgtgagtccgtgtgtctcctccaagacaaca
gtctctacagcaggcatgctgggctttgaagacaaatttaaaccagcacccaacacatgg
gattgtgatacctgtctggtccagaacaaacctgaagctacaaaatgtatagcatgtgag
acaccaaagcctggaacaggagtgatgcctgctctcacaatgccagtggtcatggacagc
tcggtgacagtgacatccacctccagcagcactggcacaacagtcactctggggtttgga
gacaaatttaaacagccaaaaggctcttggaactgttcagtgtgccttctacaaaataag
gcagaagacagcaaatgtgtagcttgtcagtctgagaaaccagggagttcagtgcctgtg
accagtagcagtgtttgtgcattttctgcttcttctggaggttttctggatttagacaaa
ttcaagatgcctgaaggaagttgggaatgtgaggtctgcatggtccaaaacaaagcagaa
gccacaaaatgcatagcctgtgaaaatgcgaagccaggcaccaaagcagagctcaaaggt
tctggtactactaccgtgtctacaaatgctgcaatgccatcatttacatttggtgtcccg
tcatcgtcctctgaatcttctcaaacattaggtagcacaggaaattttaaatttggagaa
caaagtagctttaagttcggcattgcatccgaatctgcatcgtctaacactgtgactgga
ggatttaagtttcctactagttcagagaacttcaaatttggagtttcttcctcagactct
aaatcagaagacagcaaaaaagaaagtaaaagtaacagttttacctttggacttccatct
acaagcagtcaggctccttcaacatttcagtttggaacgacaagtctggggcagcaggaa
aagaaagaggaaccagttttgggaggttttggttttgctacaagttctacttcttccata
gctactaatgagaataaaactggagtcggtggcttcacttttggaacagtggcagaaaag
gatgcagcatcacctgctttgccatttaagaagtcagatgagaaaaaggatgaaactgtt
tcaacaaagggaggcttctcttttggcagtgtggagtctgcaccagcctcacagtttgtt
ttgggaagggcagaagagaagcaggaccctgtcacttctgctgctccattagcatttgga
aagaaagctgacaatgaagacttaaaggcacagcctatcttttcatctgggacagctgag
cataccaaagaggagagcacagcaaaacctgtattcaattttagttttggtaaaccattg
gaaaaggaaagtgagcaggcaaaggcaccttttgcctttggagcaccaaccagtacctgc
gatcaaggagcatccttcagcttcttgagctccagttcctccagcacagtggtacccacc
acttcagccaacagcagcagcgtgtttggcagcaccctctcttcctcaaaccctcagcca
gttcccactccctttgtgtttggacagcccagcaacactgtgaccagctctgtttttggc
aatcctgcagagtctgcaacatctcagtcatttggcttctctcaagagagcaaaacagca
accacatcttccagcaccggctcaactcttactccgtttctctttcgttcaggagagagc
agtaccaatgcagcaaattcaggatttacttttggagccacaactacatcaaattcaaca
gggtcatcgtcttcgtttctgtttggctctgggcctccagcgcctgctgctggcccagcc
tttggcgccagtcagttaccagcatttggcccaagcccaggctccggccagcaaagcgct
ccaagctttggatcgctgtcgacaacgttgttttctgctggctctcagcctgctccatct
gccttcggctcggtgacaagcagcactcagccctctgttttcggacagcaggcagcccat
cagccagcttttggctctggtacccccagtgctggttctgtattccagtttggaagtaat
actactaatttcagctttccaaataacccaggagtattcacttttggtgcaaatcctcct
gcatcagcagctcctgcaccaccttctggcacttcaggattttcgttcagccagcctcca
acatttacagtggggactaatgggaaaaatgttttctctgcctctggaccttcagttgct
ggtcggaagataaagactgcaattagacgtagaaagtaa
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integrated database retrieval system
