Vidua macroura (Pin-tailed whydah): 128805372
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Entry
128805372 CDS
T11570
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
vmc Vidua macroura (Pin-tailed whydah)
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vmc03000
]
128805372 (PRDM1)
Transcription factors [BR:
vmc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128805372 (PRDM1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-met
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
128805372
NCBI-ProteinID:
XP_053829978
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All DBs
Position
3:complement(71386924..71411703)
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AA seq
822 aa
AA seq
DB search
MRIKGCFLFFQAATPCSSDAVSFKNLVKGREWTMKMDMEDADMTLWTEADFEEKCTYIVN
DHPLDPSADGGTLTQAEASLPRNLTFKYASNCKEVTGVISKEYIPKGTRFGPLVGEIYTS
DTVPKNANRKYFWRIYSSGELHHFIDGFNEDKSNWMRYVNPGYSVQEQNLAACQNGMNIY
FYTIKPIPANQELLVWYCRDFAERLHYPPSRELTMMNLTQTHINPKQHSADKDELYQKSV
PKKEHSVKEILKMESNPPKGKDFFQTNISPVTPEKDLDDLRKNYSPERCFFPRVVYPIRP
HIPEDYLKASLAYGMDRPSYITHSPIQASTTPSPSGRSSPDQSLKSSSPHSSPGVTVSPL
APTSQEHREPYSYLNGSYGSEGLGSYPGYAPPGHLSPAFLPSYNPHYPKFLLPPFNMSCN
NLSALNNINGINNFNLFPRMYPLYGNLLSGGSLSHHMLNPTTLPSSLPSEGGRRLLQPDH
PRDFLIPAPNSAFSVTGAAASMKDKPCSPTSGSPTAGTAASSEHIMQPKPTSVVLAATGG
EEAMNLIKSKRNVTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPF
KCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKL
CPAKFTQFVHLKLHKRLHTRERPHKCIHCHKSYIHLCSLQVHLKGNCPVAPASGLSMEDL
NRINEEIEKFDISDNADKLEEVEDNIDLTSIVEKDILTMLRREMEGANLKVSLQRNLGNG
LISSGCNLYESSDMSVMKLPHGHPLPLLPVKVKQETIEPMDP
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaggattaaaggctgttttctttttttccaggctgctacaccgtgtagctcggacgct
gtgagtttcaagaatctggtgaaagggagagagtggacaatgaaaatggacatggaggat
gctgacatgactctgtggacagaggctgattttgaagagaagtgcacatatattgtaaat
gatcatccgctggatcccagtgccgatggaggcactctaactcaggcagaggcttccttg
ccaaggaacttgactttcaaatacgcatctaactgcaaagaggtcactggagtgataagc
aaagagtacatcccaaaaggaacacgctttggacccctggtaggagagatctataccagt
gatactgttcccaagaatgcaaacagaaaatacttttggcggatctattcaagtggtgaa
cttcaccacttcattgatggatttaacgaggacaagagcaactggatgcgttatgtaaac
cctggctactctgttcaggagcagaacttggctgcttgtcagaatggaatgaacatctac
ttctataccatcaagcccatccctgccaaccaagagctgcttgtgtggtattgccgagac
tttgcagagaggctgcactatcccccctccagagagctgacaatgatgaacctcacacaa
acccacattaatccaaagcagcacagcgctgataaagatgagctttatcagaaaagcgtc
ccaaagaaggagcacagtgtgaaagaaatcctgaaaatggaatccaatcctcctaaagga
aaagacttctttcagaccaacatttcaccagttactccagaaaaagacttggacgattta
cgtaagaactatagcccggagaggtgtttcttccctcgagttgtctacccgatccgacct
cacattccagaagactatctgaaagcttctttagcatatggcatggacagacccagctac
attactcactcgcccatccaggcatctactacgccaagtccttccgggaggagcagccca
gaccaaagtttaaaaagttcaagccctcacagtagtccgggggtcacagtttcacctctg
gcacctacttcccaagagcacagagagccatactcttacttgaacggatcatatggctca
gaaggattggggtcttatcctggatatgcaccccctggccacctctcacctgcctttcta
ccgtcctataacccccattaccccaaattcctgttacctccattcaatatgagctgtaat
aacctgagcgctttgaacaatatcaatggcatcaacaatttcaatctcttcccaaggatg
taccctctttatggcaacctgctcagcggaggtagcctttcccaccacatgctcaacccc
accacgctccccagctcattgcccagtgaaggaggccgtcgattgctgcagcctgatcat
ccgagagacttcctcataccagcacccaacagtgccttctctgtcacaggcgctgctgcc
agcatgaaggacaagccatgcagccctaccagtgggtcccccaccgctggtacagcagcc
agttcggaacacataatgcaacctaaacctacctcagtggtgttggctgccaccggcggt
gaagaagccatgaatctcattaaaagtaagaggaatgtgactggttacaaaaccctccca
tacccactgaaaaagcagaatgggaagatcaagtacgaatgcaatgtttgctccaagacc
tttggccagctctccaatctgaaggtgcacctccgagtacacagtggagagagaccattt
aaatgccagacttgcaataagggcttcacgcagctggctcacctccagaagcactatctg
gtacacacgggagaaaaaccccacgagtgtcaggtttgtcacaagcggttcagcagcacc
agcaatctcaaaacccacctgcggctccactctggagagaagccttaccagtgcaagctc
tgcccagccaaattcacccagtttgtgcacctgaagctgcacaagcgtctccacacccgg
gaacgcccccataaatgcatccactgccacaagagctacattcacctctgcagcctccag
gtccacctgaagggcaactgccccgtcgccccggcctctggcctctccatggaggacctg
aaccgaatcaatgaggagattgagaagtttgacatcagtgacaatgctgacaagctggaa
gaagtggaggacaatatcgacttaacatcgatcgtggagaaggatatactgaccatgctc
aggagggaaatggaaggagctaaccttaaagtctctctacagaggaacctgggaaatggg
cttatctcctcaggatgcaacctttacgagtcatcagatatgtcagttatgaagttgcct
catggtcacccactacctctgttacctgtaaaggtcaagcaagaaacaattgaaccaatg
gacccttaa
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