Vidua macroura (Pin-tailed whydah): 128806132
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Entry
128806132 CDS
T11570
Symbol
EXOSC9
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128806132 (EXOSC9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vmc03019
]
128806132 (EXOSC9)
Messenger RNA biogenesis [BR:
vmc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128806132 (EXOSC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
128806132
NCBI-ProteinID:
XP_053831446
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Position
4:complement(15529702..15534529)
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AA seq
441 aa
AA seq
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MKATPLSNCERRFLLRAIQEKKRLDGRQCYDYRNIRVSFGADRGCCMVELGRTRVLAQVS
CELVPPKPSRPTEGVLFFNLELSPMAAPGLEPGRQSELLVSLNRLLERCLRDSKCIETES
LCVVAGEKVWQIRLDMHLLNHDGNITDAASIAGIVALCHFRRPDVSVQGEEVTVYTPEER
DPVPLSIHHMPICVSFAFFHQGTYLLVDPTEREERVMDGLLVIAMNKHHEICTIQSSGVV
MLLQDQILRCSKITAVKVAEITELIQKALENDQKARKEGGKFGFAESIPNQRITAFKMAS
AAVDTNDVEEQAGEIIAKADPPSEVFANPVLHTPGTAQIGEGIESSWGDLEESEKEEAAE
EEGESEAAAFECEKVETEDTSTLRETKSDEPIVLSDSEEEEVVILEPQELPQKTRTQTSS
KQENPSKKAFNKRRRKKRTSR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgactccgctctccaactgcgagcggcgcttcctcctgcgcgccatccaggag
aagaagcgcctggacgggaggcaatgctacgactaccggaacatccgcgtctccttcggc
gccgaccgcggctgctgcatggtggagctgggcaggaccagggttcttgcacaggtttcg
tgtgaacttgttccccctaagcccagtcggcccacggaaggtgtgctcttctttaatctg
gagctctcaccaatggctgcacctgggctggagcctggcagacaatccgagttactggtg
tcactgaacagactactggagcgatgcctcagagattccaaatgcattgaaacggaatct
ctctgcgttgttgctggtgaaaaggtttggcaaattcggctggacatgcacctgttaaac
catgatggcaacatcactgatgctgccagcatagcagggattgtagctctgtgtcatttt
cgtaggccagatgtgtctgtgcaaggagaggaagtaactgtgtacactcctgaggaacgt
gatcctgtccccttgagtatccaccacatgcccatttgtgtcagttttgccttcttccat
caaggaacctatttattggtggatccaactgaacgtgaggagcgggtgatggatgggctc
cttgtcattgccatgaataaacaccatgaaatttgtaccatccagtccagtggagtggtc
atgctgctgcaggatcagattctgagatgcagtaaaataacagctgttaaagtcgcagaa
ataacagaactgattcagaaagccttggaaaacgaccaaaaagccaggaaagaaggcggg
aagttcggctttgcggaatccatccccaaccaaaggatcactgccttcaaaatggcgagt
gctgctgtggacaccaatgacgtggaagaacaggctggagaaatcattgctaaagctgac
cctccttcggaagtttttgccaatccagtattgcacactcctgggacagcccagattggg
gaaggaatagagagctcctggggagaccttgaagaatctgagaaggaagaagcagcggaa
gaagaaggtgaaagtgaggcagctgcttttgaatgtgaaaaagtggagactgaggataca
agtacactgagggaaactaagagtgatgaacccattgtactgtctgacagcgaggaggaa
gaagttgtcattctggaaccacaggaactaccacagaaaacaagaacacagactagctcc
aaacaagaaaatccaagtaagaaagcatttaacaaaaggagaagaaagaagagaacttct
cgttaa
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