KEGG   Vidua macroura (Pin-tailed whydah): 128806132
Entry
128806132         CDS       T11570                                 
Symbol
EXOSC9
Name
(RefSeq) exosome complex component RRP45
  KO
K03678  exosome complex component RRP45
Organism
vmc  Vidua macroura (Pin-tailed whydah)
Pathway
vmc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vmc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    128806132 (EXOSC9)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vmc03019]
    128806132 (EXOSC9)
Messenger RNA biogenesis [BR:vmc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     128806132 (EXOSC9)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 128806132
NCBI-ProteinID: XP_053831446
LinkDB
Position
4:complement(15529702..15534529)
AA seq 441 aa
MKATPLSNCERRFLLRAIQEKKRLDGRQCYDYRNIRVSFGADRGCCMVELGRTRVLAQVS
CELVPPKPSRPTEGVLFFNLELSPMAAPGLEPGRQSELLVSLNRLLERCLRDSKCIETES
LCVVAGEKVWQIRLDMHLLNHDGNITDAASIAGIVALCHFRRPDVSVQGEEVTVYTPEER
DPVPLSIHHMPICVSFAFFHQGTYLLVDPTEREERVMDGLLVIAMNKHHEICTIQSSGVV
MLLQDQILRCSKITAVKVAEITELIQKALENDQKARKEGGKFGFAESIPNQRITAFKMAS
AAVDTNDVEEQAGEIIAKADPPSEVFANPVLHTPGTAQIGEGIESSWGDLEESEKEEAAE
EEGESEAAAFECEKVETEDTSTLRETKSDEPIVLSDSEEEEVVILEPQELPQKTRTQTSS
KQENPSKKAFNKRRRKKRTSR
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgaaggcgactccgctctccaactgcgagcggcgcttcctcctgcgcgccatccaggag
aagaagcgcctggacgggaggcaatgctacgactaccggaacatccgcgtctccttcggc
gccgaccgcggctgctgcatggtggagctgggcaggaccagggttcttgcacaggtttcg
tgtgaacttgttccccctaagcccagtcggcccacggaaggtgtgctcttctttaatctg
gagctctcaccaatggctgcacctgggctggagcctggcagacaatccgagttactggtg
tcactgaacagactactggagcgatgcctcagagattccaaatgcattgaaacggaatct
ctctgcgttgttgctggtgaaaaggtttggcaaattcggctggacatgcacctgttaaac
catgatggcaacatcactgatgctgccagcatagcagggattgtagctctgtgtcatttt
cgtaggccagatgtgtctgtgcaaggagaggaagtaactgtgtacactcctgaggaacgt
gatcctgtccccttgagtatccaccacatgcccatttgtgtcagttttgccttcttccat
caaggaacctatttattggtggatccaactgaacgtgaggagcgggtgatggatgggctc
cttgtcattgccatgaataaacaccatgaaatttgtaccatccagtccagtggagtggtc
atgctgctgcaggatcagattctgagatgcagtaaaataacagctgttaaagtcgcagaa
ataacagaactgattcagaaagccttggaaaacgaccaaaaagccaggaaagaaggcggg
aagttcggctttgcggaatccatccccaaccaaaggatcactgccttcaaaatggcgagt
gctgctgtggacaccaatgacgtggaagaacaggctggagaaatcattgctaaagctgac
cctccttcggaagtttttgccaatccagtattgcacactcctgggacagcccagattggg
gaaggaatagagagctcctggggagaccttgaagaatctgagaaggaagaagcagcggaa
gaagaaggtgaaagtgaggcagctgcttttgaatgtgaaaaagtggagactgaggataca
agtacactgagggaaactaagagtgatgaacccattgtactgtctgacagcgaggaggaa
gaagttgtcattctggaaccacaggaactaccacagaaaacaagaacacagactagctcc
aaacaagaaaatccaagtaagaaagcatttaacaaaaggagaagaaagaagagaacttct
cgttaa

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