Vidua macroura (Pin-tailed whydah): 128806161
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Entry
128806161 CDS
T11570
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128806161 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vmc03019
]
128806161 (FIP1L1)
Messenger RNA biogenesis [BR:
vmc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
128806161 (FIP1L1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
128806161
NCBI-ProteinID:
XP_053831506
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All DBs
Position
4:complement(47222874..47261226)
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AA seq
560 aa
AA seq
DB search
MSTGEAERLSADADGAAGDEEEEWLYGDENEAERPEEEKSSAPPPPGSEEEAAENGIVKT
KVAEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQFSYGAAPVNLNIKAGGRAYGSSGAKVK
GLDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRM
GLEILPVTSTTNKITVQQGRTGNLEKELAVQSTKPDFTSPPALFKSGIPTNRRISGTIDV
IGQTITISRVEGRRRANENSNIQVLSERSNPEVDSFTKPPPFFPPGAPPTHLPPPPFLPP
PPTVSTAPPLIPPPGIPITVPPPGFPPPPGGPPPSLIPTIDSGHSSGYDGRPVRAFSYGS
DDEVELKTNDLLKVRKASKADKQKGRSPQYFTFPHPAGSAPSWSSLLDTSKQWDYYARRE
KDRERERERSRDRDRDRDRDRDRDRDRARDRERDRDHSPSSSAFNSDEERYRYRDYAERG
YDRHRTSREKEDRHRDRRHREKEETRHKSSRSNSRRRHDSEEGDSHRRHKHKKSKRSKEG
KEASGEPAPEQENTEAAPVE
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccggcgaggcggagcggctgtcggcggacgccgatggggccgccggggacgag
gaggaggagtggctctatggcgatgaaaatgaagcagagagaccagaggaagaaaaatct
agtgctccacccccacctggaagtgaagaggaagctgcagaaaatggcattgtgaaaacg
aaggtggcagaggctgaggatgacagtgatagtgatagtgatgacgatgaagatgatgtt
caagtcaccataggggatattaagacaggagctccacagtttagttatggagcagcacct
gtgaatctcaatattaaggcaggaggacgagcttatggatcttctggtgcaaaagttaaa
ggactggatctagatgcaccagggagtattaatggtgtgccacttcttgaagtagattta
gattcatttgaagataaaccttggagaaagccaggggctgatctctcagattattttaac
tatggcttcaatgaagatacctggaaagcttactgtgaaaaacaaaagagaatacgaatg
ggtcttgaaattttgccagttacctcaaccacaaataaaattacggtacagcaaggcaga
actggaaatttggagaaagagttggcagtgcagtcgaccaaacccgatttcacatctcct
ccagccttattcaaatcaggaattccaacaaacaggcggatatctggcacaatagatgtg
attggacagaccatcactatcagcagggtggaaggacgacggcgtgctaatgaaaacagc
aacatacaggttctttcagaacgctctaatcctgaagtagacagttttaccaagccacct
ccatttttccctccaggagctccacctactcaccttccaccgcctcctttcctcccaccc
cctccaactgtcagtactgctccacctctgattcctccaccaggtataccaataacagtg
ccaccaccaggttttccaccaccacctggcggtcctccaccttccctcatacccacaata
gacagtggacattcttctggctatgatggtcgtcctgttcgtgcattttcatatggcagt
gatgatgaagtggagctcaaaacaaacgatttattgaaagttaggaaagctagcaaggca
gataagcagaaagggagaagtcctcagtacttcacctttccacaccctgcaggttctgca
ccctcatggtctagtcttttggacaccagcaaacaatgggattactatgcacgaagagag
aaagatagggaacgtgagagagagagatcccgagatcgggatcgcgaccgggaccgggac
cgagacagagatcgagaccgtgccagagacagggaaagggaccgagatcacagtccgtct
tcaagtgcgttcaacagtgatgaagaacgctacagatacagagactatgcagagaggggc
tacgaccgccataggacaagcagagagaaagaagacagacacagagacaggagacacaga
gagaaagaagagactcgacacaagtcatctcgaagtaacagcagacgtcgtcacgacagt
gaagaaggggatagccacagaaggcacaaacacaagaagtccaaaagaagcaaagaagga
aaagaagccagtggtgaacctgctcctgaacaggaaaacactgaagctgcccctgtggaa
tag
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