Vidua macroura (Pin-tailed whydah): 128806266
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Entry
128806266 CDS
T11570
Symbol
LSM6
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc03018
RNA degradation
vmc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128806266 (LSM6)
09123 Folding, sorting and degradation
03018 RNA degradation
128806266 (LSM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vmc03019
]
128806266 (LSM6)
03041 Spliceosome [BR:
vmc03041
]
128806266 (LSM6)
Messenger RNA biogenesis [BR:
vmc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128806266 (LSM6)
mRNA degradation factors
5'-3' decay
Lsm complex
128806266 (LSM6)
Spliceosome [BR:
vmc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
128806266 (LSM6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
128806266
NCBI-ProteinID:
XP_053831667
UniProt:
A0A852EWT1
LinkDB
All DBs
Position
4:7271778..7277838
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AA seq
80 aa
AA seq
DB search
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKY
GDAFIRGNNVLYISTQKRRM
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtctacggaagcaaacccccagtgacttcctaaaacaaatcattggaaggccagtt
gttgtaaaattaaattctggagttgattatcgaggtgtcctggcttgcctggatggatat
atgaacatagctctggagcagactgaggaatatgtaaatggacagttaaagaacaagtac
ggggatgcatttatccgaggaaataatgtgttgtacataagcacccagaagaggaggatg
tga
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