Vidua macroura (Pin-tailed whydah): 128806386 Help Entry 128806386         CDS       T11570                                  Symbol SYNPO2 Name (RefSeq) synaptopodin-2 isoform X1   KO K24066   synaptopodin-2 Organism vmc  Vidua macroura (Pin-tailed whydah) Pathway vmc04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:vmc00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     128806386 (SYNPO2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:vmc04990]     128806386 (SYNPO2) Domain-containing proteins not elsewhere classified [BR:vmc04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    128806386 (SYNPO2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PDZ PDZ_6 PDZ_2 Calsarcin Pept_S41_N_bact Motif Other DBs NCBI-GeneID:  128806386 NCBI-ProteinID:  XP_053831878 LinkDB All DBs Position 4:complement(16257711..16332641) Genome browser AA seq 1274 aa AA seqDB search MLPNCTRKMGTGDYLCIAMSGGAPWGFRLQGGKEQKQPLQIAKVRSKSKAAKAGLCEGDE VVSINGKPCGDLTYAEVIVLMESLTDVLQMLVKRSSSGINETLNAERENGKHENIKIEDY GENTTLQMNIAQKIPHGDLCITEIYSGTHHGAAESNTHFAETKQETTQSHRIPPKVIGTP KVIVTDEAGVRGSAEEGPGAMVELQVSLSNDAHKATSAPAVTLLGAEKCPPSGRGPSASQ GGSSPLIAVPLGVKEGNIQWSNKVVHFSSSKEVKRIQGAAPSIPRVEVILDCSDREKEAP RSLSERGCVDSQVEGGQSEAPPSLLSFAISPEATVQGEDSKHSEKEHRPLKHRARHARLR RSESLSEKQVKEAKSKCKSIALLLTAAPNPNSKGVLMFKKRRQRARKYTLVSYGTGELER DEDEGEEGEGEEGDKENTFEVSLLATSESEIDEDFFSDINKDGKIVTFDWDSGLLEVEKK TKSGEEMQTLADSTGKGALMFAKRRQRMDQITAEQEEMKASTVQTEEHRETTVTENFQKV SSSVYQSKEEEMSRQQSCVSKSYTDVSQNHSKVVQQNGFGLAPGTNLSFQSSGTQKAASL NKTAKPFPSGVQNRAAAPFSPIRNVTSPLSDAAAAPPYCSVSPPAEAFYRPVSAPVVSKA APPAWAATEPTEHIASRDERIAVPAKRTGILQEAKRRSTSKPMFNFKDAPKVSPNPALLS LVHNAEGKKGTGAGFESGPEEDYLSLGAEACNFMQTQASKQKAPPPVAPKPSLKVSPSAS TPVSPVWSPSVAASNKPPSFPAPASPQAAYPAPPKSPQYPHSPVHPPSTLDLAGPFKGPQ ASLASPNLAPKATPVTPSAAETKPPFEMPPAMSGKGAQLFARRHSRMEKYVVDSETVQAN MARATSPTPSLPASWKYSSNVRAPPPIAYNPIHCPSYPPAATKPSSKAAAATKNTKRKPK KGLNALDIMKHQPYQLDPSLFTFQPPKENLAMKQTSKLSTSKQTLPLPPYLPPGAGSPTW VRPSSVYSVPAYGSQPSFPSNASLPGNESYSPTGYSAFSKPETTTSSLFTAPRPKFSAKK AGVTAQGRSSGRSLSLPGTPSSFISRAMSPTSPLVFQPAPDYFSKPDTAADKPGKRLTPW EAAARSPLGLVDEAFGPQSMQESIAANVVSAARRKTLPEPPDEWKLKVSNEPSATSGSIA LLGGKQSGVLSPQKSSLSAPSAPTQAGPKLQYPYCTQRSTTDPDIMSMDSRSDYCLSTAD SNYNPQPRGWRRPT NT seq 3825 nt NT seq  +upstreamnt  +downstreamnt atgctgccaaactgcaccaggaaaatgggcacaggagattacctctgcattgctatgagt ggaggggcgccgtggggcttcaggctgcaagggggcaaggagcagaagcagcctctgcaa attgccaaggttcgcagcaaaagcaaagcagccaaggctggactgtgtgagggggatgag gtggtgtctatcaatggcaagccttgtggagacctaacctatgctgaagtcattgttctg atggaaagcctgactgacgtcctgcagatgcttgtcaagagatcctccagtggaataaat gaaaccttgaatgctgaaagagaaaatgggaagcacgagaatataaaaattgaggactat ggggagaacaccacactgcaaatgaacatagcgcaaaagataccccatggagatttatgc atcacagagatttacagtgggactcaccatggagcagcagagagcaacacacactttgct gaaacaaaacaagagaccacacaaagccacagaattcctcctaaagtgataggcaccccc aaagtgattgtgacagatgaggctggtgtcagagggtcggcagaagaagggccaggtgct atggttgagctgcaggtgtccctctcaaatgatgcccacaaggccaccagtgctcctgct gtgactctcttgggggcagaaaagtgccccccttcaggcagaggacccagtgcatcacag ggcgggagcagccccctcatcgcagttcccctgggtgtgaaggagggcaacatccagtgg tcaaacaaagtagtccacttttctagcagcaaggaggtcaagaggatccaaggtgcagct ccatctatccccagggtggaggtgatcctagactgctcagacagggagaaggaagcaccc aggtctctgtctgaaagggggtgtgttgattctcaagtagaaggagggcagtcagaagca cctccttccctcctctcctttgcaatctcaccagaagccacagtgcagggagaagacagc aagcactcagaaaaggaacacagacctctcaagcacagggcaaggcacgcaaggctccga cgaagcgagagcctgtcggagaagcaggtgaaagaagccaaatctaaatgtaaaagcatt gcactgctgctgacggcagctcccaaccccaattccaagggggtgttgatgttcaagaag cgccgccaaagggcgaggaaatacactttagtcagctacgggactggggagttagaacgt gacgaggacgagggtgaagagggtgaaggtgaagagggggacaaggaaaacacttttgag gtgagcttgcttgcaacgagtgagtcggaaatagatgaagattttttctctgacattaac aaggacggcaagattgtgacatttgactgggacagtggtctgctcgaggtggaaaagaag acaaaaagtggagaggagatgcagacgcttgcagacagcacagggaaaggggccctcatg tttgccaagaggcggcagaggatggatcagataacagccgagcaagaggagatgaaggca agcacagtgcagacagaggagcacagggaaaccaccgtgacagagaacttccagaaagtg agctcttccgtctatcaatcaaaagaggaggaaatgtcaagacagcagagctgtgtgagc aaaagctacacagacgtgagccagaatcacagcaaagtggtacaacaaaatggctttggc ttagcacctggcacaaacctctcttttcagtcctctggaactcaaaaggcagcatctctg aataaaacagcaaaacccttcccttccggagttcaaaaccgagcagctgcaccattttca cccataagaaatgtcaccagtcccctttcagatgcagcagcagcacctccttactgctct gtcagcccaccagctgaggctttctacagacctgtctcagctcctgtggtcagcaaggct gccccacctgcgtgggcagccaccgagcccacggaacacatcgcgtccagggatgaaagg attgccgtgccagccaaaagaaccgggatactgcaggaggcaaagagaagaagcacttcc aaacctatgttcaatttcaaagatgcacccaaagtaagtcctaatcctgccctgttgtcc cttgtacacaatgcagagggcaaaaaagggactggagccggttttgagtcaggacccgaa gaagactacctcagtttgggagcagaagcttgcaatttcatgcagactcaagcatctaaa caaaaggcccctcctcctgttgctccaaaaccttcactcaaggtgtctccttctgctagt actccagtttcaccggtttggtcaccttcagttgcagcttccaacaagcctccttctttc ccagcaccagcttcacctcaggcagcgtatcctgcaccacccaaatctccacagtatcct cattctcccgtccatcccccaagcactcttgaccttgctggtcctttcaaagggcctcag gccagcctggcgagtccaaaccttgcccccaaggcaacaccagtcaccccaagtgctgca gaaacaaagcctccctttgagatgccgccagctatgagtgggaaaggagcacagctgttt gccaggaggcattcccgaatggagaagtatgtggtggattcagagactgtgcaggcaaac atggcacgagccacatccccaactccatctttaccagcttcttggaaatattcatctaat gtccgagcacctccacccatcgcttataatcccatccactgtccatcttaccctcctgct gctaccaagccttcctctaaggccgctgctgctaccaaaaacacaaaaagaaaacctaag aaaggtctcaatgctttggatatcatgaaacatcaaccttatcaacttgatccatcttta tttactttccaacctcctaaagaaaaccttgccatgaagcagacatcgaagctgtccact tcaaagcaaacactgcctttacctccctaccttccacctggtgctggctctcctacatgg gtccggccgtcttcggtgtactccgtgccagcctacgggtcccagccttcattcccatct aatgcctcccttccagggaatgaatcatattcacccacaggctactctgcgttttctaag ccagaaaccaccacatcctctttgtttactgctccgaggccaaaattttcagccaagaaa gctggcgtcactgcacagggaaggagcagtggccgctcattatcgcttcctgggacacct tcttcattcatctctcgagccatgtctcctacttctcctcttgtatttcagcctgcccct gactacttcagcaagccagacacagcagctgacaagcctggcaagagactgactccctgg gaagcagcagccagatctccccttggcctcgtggatgaagcttttggcccccaaagcatg caggaatccattgctgctaacgtagtatcggctgctcgcaggaaaacgcttcctgagcca ccagatgaatggaaacttaaagtttctaatgagccctcagccacaagtggtagcatagcc ttactgggagggaagcagtcgggggttctgtcaccccaaaaaagctctctgtctgcccca agtgcccccacccaggctggccctaagctgcagtatccctactgcacgcagcgctccaca acagatcctgatataatgtccatggattccaggtctgactattgcttgtcaacagctgat tcaaactacaatccacagccaaggggatggaggcgtccaacatga

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