KEGG   Vidua macroura (Pin-tailed whydah): 128806770
Entry
128806770         CDS       T11570                                 
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
  KO
K24356  collagen type XXV alpha
Organism
vmc  Vidua macroura (Pin-tailed whydah)
Brite
KEGG Orthology (KO) [BR:vmc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:vmc00536]
    128806770 (COL25A1)
Glycosaminoglycan binding proteins [BR:vmc00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   128806770 (COL25A1)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 128806770
NCBI-ProteinID: XP_053832562
LinkDB
Position
4:complement(26904698..27202678)
AA seq 723 aa
MGGGGKEIKAAAAEGCASALGKSRGAAGHDGNGKPGGSGKPGLGKPGCGGDRCPRRAGPV
GSALAALLSALAAASCVYLGVRTSDLQARVAAIEGARGGFSAAAPLPPLPGFSLEQLNAM
MQEKVERLLAQKSYEHLAKIRVAREAAPECNCPPGPPGKRGKRGRRGETGPPGQPGPQGP
PGPKGEKGDQGDQGPRGLPGFPTVAALHSNQILTVKGDQGQAGPPGPPGPPGPRGPPGDT
GKDGPRGMPGLTGEPGKPGEQGLTGPQGPPGQKGSVGVPGVPGKDGQVGEPGLPGIAGEK
GEAGLKGDPGERGEKGDAGENGLKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPG
LPGLPGIKGEPGFIGPQGEPGLPGLPGTKGDRGEAGPVGKGERGEPGIPGPKGKTGEPGS
RGPKGSKGDTGERGDTGSAGPRGPPGQKGDQGATEIIDYNGNIHEALQRIATLTVTGPPG
PPGPQGLQGPKGDPGSPGAPGVDGEQGPKGSKGDTGDPGIPGEKGGIGLPGLPGANGMKG
EKGDVGLPGAQGPSMIGPPGPPGPHGPPGPMGPHGLPGPKGEPGLNGLKGLKGEPGQKGD
RGPLGLPGASGLDGKPGARGIDGPVGPHGPAGPKGERGEKGTVGDPGPRGPYGLPGFPGP
RGEKGDIGEKGEKGFRGIKGEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQKGVTPWLIA
KKR
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggggggcggaggaaaggaaatcaaagctgccgcagctgaagggtgtgcgagcgcgctg
gggaagagccgaggagccgcaggacacgatggcaacgggaagcccggcggcagcgggaag
cccggcctcgggaagcccggctgcggcggggaccgctgcccgcggcgggccgggccggtc
ggctccgcgctggccgcgctcctctcggcgctggccgcggcttcctgcgtctacctgggc
gtgcggaccagcgacctccaggccagggtcgcggccatcgaaggcgcccgagggggcttc
tctgccgccgccccgctcccgccgctgcccggcttttccttggagcagctgaacgcgatg
atgcaggagaaagtggagcgacttctcgcccagaaatcctacgagcacttggcaaaaata
cgagtagcgagagaagcggctccagagtgcaactgcccaccaggtcctcctgggaaaaga
ggtaagcggggaagaagaggagagactggacctcctggtcagcctggtcctcaaggccct
cctggtccaaaaggcgagaagggagatcaaggtgatcagggccctcggggtctgccaggc
ttccccacagttgctgctctgcacagtaatcagatcctcaccgttaagggggaccaagga
caagctggaccccctggacctccagggccaccaggacccagaggtcccccaggagatacc
ggcaaagatggtcctcgtgggatgcctggcttaacgggtgagccaggaaaaccaggagaa
caaggattgacaggacctcaggggcctccaggacaaaagggttctgttggagtgcctggt
gttccagggaaagatggacaagtgggtgaacctggtttgcctggcatagcaggagagaag
ggagaagcagggctcaagggtgaccctggagaaagaggagaaaagggggatgctggtgag
aatggactgaagggtgacacaggagaaaagggtgaccctggctcttctgcagctggaatt
aagggtgaacctggtgaatctgggcggcctggacaaaagggtgaaccaggccttcctggg
cttcctggactccctggaataaagggtgaaccaggtttcattggtccacaaggagaacct
gggttgcctgggctaccaggaacaaagggtgacagaggagaggcaggccctgttgggaag
ggtgagcgaggtgaacctggaatccctggaccaaaggggaaaacaggtgaacctggatct
agaggccccaaagggtcaaagggtgatacgggtgagagaggtgacacaggatctgcaggt
ccacggggaccacctggacagaaaggtgatcaaggtgcaacagagataattgattataat
ggcaacatccatgaagctctgcagaggattgccaccctgactgtcacgggaccaccagga
ccaccaggaccccaagggttgcaaggcccaaagggtgatcctggatccccaggagctcca
ggagttgatggagagcagggtcctaaaggctcaaaaggagacacaggtgatcctggaata
cctggagaaaagggaggaatcggactgcctggcctaccaggagccaatggcatgaaaggc
gaaaaaggagacgttggtttgcctggtgcccaaggtccttcaatgataggaccacctgga
ccaccagggccacatggtcctccaggccccatgggacctcatggactgcctggcccaaag
ggtgaaccagggttaaatggtcttaaaggattgaaaggtgaaccaggtcaaaagggtgac
agagggccccttggtcttccaggagcatctggcttagacgggaagccaggagcccggggc
atagatggcccagttggtccccatggccctgcaggtcccaaaggagagagaggtgagaag
ggaactgtaggtgaccctggaccccgaggaccatacggcttgcctggtttccctggtcct
cgaggagaaaagggtgatataggagaaaagggagaaaagggattccgtggaattaagggg
gaaaaaggggagccaggccagcctggcctggatgggctggatgccccttgccaattgggt
cctgatggattaccaatgcctggctgttggcaaaagggagtcacaccatggctcattgct
aaaaagagataa

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