Vidua macroura (Pin-tailed whydah): 128807089
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Entry
128807089 CDS
T11570
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3 isoform X1
KO
K06099
cold shock domain protein A
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128807089 (YBX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vmc03000
]
128807089 (YBX3)
03041 Spliceosome [BR:
vmc03041
]
128807089 (YBX3)
Transcription factors [BR:
vmc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
128807089 (YBX3)
Spliceosome [BR:
vmc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128807089 (YBX3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
DUF8529
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
128807089
NCBI-ProteinID:
XP_053833107
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All DBs
Position
5:complement(30896784..30913990)
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AA seq
283 aa
AA seq
DB search
MSEAPETSAASPAAPPVPAAAAAPPAPAAPDAAPKSTASAAAPGAAVAEAAPGAAAPATT
AAAESAKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD
GETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYFGRRRGPPQSQGGEGA
VKDGVTEGGQLQVHRNPTYRPRYRRGPPRPHPAPATGEAENKENHHEANAMSQQPLRRGY
RRPYNYRRRPCRASAPTQEGKETKATETPAENPAPVTEQSGAE
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcaccggagaccagcgccgccagccccgccgcgccgcccgtcccggctgcg
gctgccgcgccgcccgcgcctgccgccccggacgccgctcccaagagcactgccagcgcc
gccgcgccgggtgcggctgttgctgaagcggcccccggcgccgccgccccagccacaacc
gcggcggccgagtcggcgaagaaagtactggccaccaaagttcttggcacagtcaagtgg
ttcaatgtcagaaatggatatggctttatcaacagaaatgataccaaagaagatgtgttt
gttcatcagacggcgataaagaaaaacaatccacggaagtacctgcgcagcgttggcgat
ggagagactgtagagtttgatgtggttgagggagagaagggtgcagaagcagccaatgtc
actggtccagatggagtccccgtggaaggcagccgctatgctgcggaccggcgccgctat
cgacggggctactttggccgacgccggggcccacctcagagtcagggtggtgagggagca
gtcaaggatggggtcacagaaggaggacaacttcaagtgcacaggaatcctacctaccgt
ccccgctatcgcagagggccccctcgcccacacccggccccagcaactggagaggctgaa
aacaaggagaaccatcacgaggccaatgccatgagccagcagccgctgcgccgtggctac
cggcgcccctacaactaccggcgccggccatgccgagccagcgctccgacacaggagggc
aaagagacaaaggcaactgaaacacctgctgaaaatcctgctccagtgacagagcagagt
ggtgctgagtaa
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