Vidua macroura (Pin-tailed whydah): 128807280
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Entry
128807280 CDS
T11570
Symbol
NUP107
Name
(RefSeq) nuclear pore complex protein Nup107 isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128807280 (NUP107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vmc03019
]
128807280 (NUP107)
03036 Chromosome and associated proteins [BR:
vmc03036
]
128807280 (NUP107)
Messenger RNA biogenesis [BR:
vmc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128807280 (NUP107)
Chromosome and associated proteins [BR:
vmc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128807280 (NUP107)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
Phage_int_M
DUF8594
Motif
Other DBs
NCBI-GeneID:
128807280
NCBI-ProteinID:
XP_053833513
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All DBs
Position
5:complement(39361672..39383379)
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AA seq
952 aa
AA seq
DB search
MGGAGGRRPCPSGPRAGAGGGGKAEPGPNRAGAMDRNGFEDMSSPHDPEMVRPGRKQGSQ
KRVSILTSLDDSIGNMTPKSQFLSRTPNSLLHQPGTALHRSSMKSSDMSAILGAGGKSPL
ILPNSGLFGNLSMLDESSWTMALSPQQRGMFVNADMSNMTEDVTMSAVLLREDDPGEAAT
MSMYSDFLHSFLKHTSTTIFDLVDEYENICNSQVNILGKIVYRATPGQQKFSKTASVLWL
LKQEMVTWRLLSSLYRDRIQSALEDETAFDITALTASEKTTVDNLFQKDSLVRQSQLVVD
WLESIAKDEIGDFSDNIEFYAKTVYWDNTLHTLKQRQSSTYMGSSRPLVTELDPDAPIRQ
KLPLDDLDQEDDARLLKYLFTLIRAGMTDEAQRLCKRCGQAWRAATLEGWKLYHDPNING
GKELEPVEGNPYRCIWKISCWRMAEEEQFNRYERAIYAALSGNLKQLLPVCDTWEDTVWA
YFRVMVDTLVEQEIRTSVVTAEEMEELPRDYLETNWTSEKVFEELQATDKRRVIEENQEH
YHVIQKFIILGDVDGLMEEVSRWLSKDRSVLPGHLLRFMTHLILFFRTLGMQTKEEVSVE
VLKTYIQRLVSEKHTDLIAFYVSHLPPELAVAQYALFLEDITESDQRHHCLELAKTAGLD
VATITKTVVENIRKKDAGEFSHHDHVLDTGTTEADQLKIDVIDWLVFDPAQRAEALKQSN
AIMRKFLASKKHEAAKDVFVKIPQDSIAEIYNQWEEQGMDTPLPAEDDNAIREHLCIRAY
LEAHETFNEWFKHMNSAPQKPSLLPQASFTEKVAHEHKEKKYEMDYGIWKGLLDALTADV
KEKMYNVLLFVDGGWMVDVREDAEDDPERTHQMILLRKLCLPMMCFLLHTVLHSTGQHQE
CLRLADMVASERHKLYTVFSKEELRKLLQKLRESSLILLDQDLDPLGYEIQS
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgggcggggcgggcggaaggcgcccatgtccttccgggccgcgggccggcgctggcggt
ggcgggaaggctgagcccgggccgaaccgcgccggggctatggacagaaatggttttgaa
gacatgtcgtccccccatgatcctgagatggtcagacctggacgaaagcaaggctctcag
aaaagagtttctattcttacatccctggatgacagtattggaaacatgacgcccaaaagc
cagtttctttcccgaacacctaattcattacttcaccagccaggtactgcattacaccgc
agctccatgaagtcatcagatatgtccgccatcctaggagcaggagggaaatctcctctc
attctaccaaattctggactttttggcaatctgtcgatgttggatgaaagtagctggaca
atggcactttcacctcagcagagaggaatgtttgtaaatgcagacatgtccaatatgaca
gaagatgtcactatgagtgctgtgttgttgcgtgaggatgatcctggggaagctgctact
atgagcatgtactcagactttctgcattcctttctgaagcatacatcaactaccattttt
gatcttgtggacgagtatgaaaatatttgtaacagtcaggtgaatatattagggaaaata
gtttatcgggcaactcctggacagcagaagttttccaaaactgccagtgtcttgtggctt
ctcaagcaggagatggtaacttggagactgctgtcctcactttatagagacagaatacag
tctgcactggaagatgaaactgcatttgatatcactgctttaactgctagtgaaaaaact
actgtagacaacttgtttcagaaagattcacttgttcgacaaagtcagctggtggtggat
tggttagagagcattgctaaggatgaaattggggacttctctgataatattgagttttac
gcaaaaacagtatattgggataacacactacacaccctgaagcagcgacagtcaagtaca
tacatgggaagttctcgtcctctggtaacagagttggacccagatgctcctattcgacag
aaactgccacttgatgatttggaccaagaagacgatgcaagattgttgaagtatctcttc
actctcatcagagcaggaatgacagatgaggcacagcgcttatgcaaacgatgtggtcag
gcttggagagctgcaactttggaaggctggaaattgtatcatgatcctaacataaatgga
ggaaaagagctggagcctgttgaaggcaatccatacaggtgcatttggaaaataagttgt
tggcgcatggctgaagaggagcagtttaatagatatgaaagagcaatctatgcagccctg
agtggaaacctcaaacagcttcttccagtttgtgatacctgggaagatactgtttgggca
tatttcagggtcatggtggacactctagtcgagcaggaaatacgaacctcagtagtaact
gcagaggagatggaagagctccctagagattatttagaaacaaactggacttcagaaaaa
gtttttgaagaacttcaggctacagacaaaaggagggttatagaggagaatcaagaacac
tatcatgtgattcagaaattcattatacttggagatgtggatggtttgatggaagaagtc
agtaggtggctttccaaggacagaagtgtgctcccaggacacctccttcgtttcatgaca
catcttattctgtttttccgcactttgggtatgcagactaaggaggaagtttctgtggag
gtcctaaagacctacattcagcggttggtgtctgagaagcacacagatttaatagcattt
tatgtcagccacctgcccccagagctcgctgtggctcagtacgctttatttcttgaagat
attactgagagtgatcaacgccaccactgccttgaattagcaaaaacagcaggtctggac
gttgcaaccataacaaaaactgttgttgaaaacatccgcaagaaggatgctggggagttc
agccaccacgatcatgtgctagacacaggcacaacagaggcggatcagctgaaaatagat
gtaattgactggctcgtattcgatcctgcacagagggcagaagcacttaagcaaagcaat
gcaatcatgaggaagttcttggcatccaagaaacatgaagctgcaaaagatgtgtttgtg
aagattccccaagactctatagcagaaatatataaccagtgggaagaacagggaatggat
actccgcttccagctgaagatgacaatgctatccgggaacatttatgtattcgtgcatat
ttggaagcccatgaaacctttaatgaatggtttaaacacatgaactcagctccacagaag
ccgtctttgttaccacaagcaagtttcactgaaaaagtggcccatgaacataaagaaaag
aagtatgagatggattatggcatttggaaaggcctcttggatgctcttacagctgatgtt
aaggagaaaatgtacaatgtgttgctgtttgttgatggaggatggatggttgacgtcaga
gaggatgccgaggatgaccctgagcgaacgcaccagatgatcctgctgcgaaagctgtgt
ctgccaatgatgtgctttttgctgcacacagtgctccacagcacggggcaacaccaggag
tgcctgcgcctcgctgacatggtcgcctcggagcgccacaagctctacacggtattttca
aaagaagaacttcgaaagcttctacagaagctgagggaatcttctctgatacttctggac
caggatcttgatcctttgggatatgaaattcagtcataa
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